Gene
RNA
| Item | Value |
|---|---|
| gene id | G51122 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 46813954 ~ 46814375 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU57116 | True | 422 | lncRNA | 0.47 | 1 | 46813954 | 46814375 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524015 | LOC106573241 | coding | downstream | 70921 | 46737435 ~ 46743033 (-) |
| tcp11l1 | tcp11l1 | coding | downstream | 716847 | 46085582 ~ 46097107 (-) |
| LOC110523921 | LOC106573228 | coding | downstream | 737213 | 46025778 ~ 46076741 (-) |
| LOC110523913 | LOC106573227 | coding | downstream | 788749 | 45987946 ~ 46025205 (-) |
| LOC110523903 | LOC106573225 | coding | downstream | 946856 | 45730235 ~ 45867098 (-) |
| LOC110524028 | LOC106561496 | coding | upstream | 2681 | 46817056 ~ 46839553 (-) |
| LOC118964698 | NA | coding | upstream | 86946 | 46901321 ~ 46902393 (-) |
| LOC118964697 | NA | coding | upstream | 131673 | 46946048 ~ 46947526 (-) |
| LOC118964694 | NA | coding | upstream | 158394 | 46972769 ~ 46974689 (-) |
| LOC118964693 | NA | coding | upstream | 223044 | 47037419 ~ 47038580 (-) |
| G51078 | NA | non-coding | downstream | 377 | 46781766 ~ 46813577 (-) |
| G51038 | NA | non-coding | downstream | 8901 | 46798561 ~ 46805053 (-) |
| G51091 | NA | non-coding | downstream | 49881 | 46763862 ~ 46764073 (-) |
| G50926 | NA | non-coding | downstream | 199533 | 46520583 ~ 46614421 (-) |
| G50886 | NA | non-coding | downstream | 366257 | 46447460 ~ 46447697 (-) |
| G51123 | NA | non-coding | upstream | 219 | 46814594 ~ 46814825 (-) |
| G51149 | NA | non-coding | upstream | 39452 | 46853827 ~ 46857698 (-) |
| G51160 | NA | non-coding | upstream | 85789 | 46900164 ~ 46911959 (-) |
| G51165 | NA | non-coding | upstream | 109653 | 46924028 ~ 46967388 (-) |
| G49962 | NA | other | downstream | 864003 | 45948958 ~ 45949951 (-) |
| G49774 | NA | other | downstream | 1092830 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 3684925 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 7791929 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 8622218 | 38187488 ~ 38191736 (-) |
| G51214 | NA | other | upstream | 250399 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 474564 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 563266 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 728001 | 47541224 ~ 47561223 (-) |
| LOC110524264 | LOC106573263 | other | upstream | 1479733 | 48291626 ~ 48304829 (-) |
