G50701


Basic Information

Item Value
gene id G50701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46873088 ~ 46886791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56647
gctagatgGCTAGCGTGATAATGACTAGCGAGGTAAAGTTAGATCATAGCTAATGTTGGCTGTGCTACTTAGCCAGCTCGCTAAGTTTACAAGGGTGTAGCTATAGCTCCTATACGTCCACACTATGCCAGGTAGTTACATTTTCTCTGTATACTTTTGTTTTATGCAGAGAGGTCCAGTCGGGTTTGGTTAAATAGTTATGTGGCTTTTGACTGTGTTTCAAGCCTAACTATGTTTATATTACTTCAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56647 True 251 lncRNA 0.41 2 46873088 46886791

Neighbor

gene id symbol gene type direction distance location
LOC110524042 NA coding upstream 11623 46854230 ~ 46861465 (+)
LOC110524021 LOC106573242 coding upstream 63072 46798486 ~ 46810016 (+)
LOC110524008 LOC106573239 coding upstream 136225 46632435 ~ 46736863 (+)
LOC110524001 mppd2 coding upstream 297147 46525358 ~ 46575941 (+)
LOC118966744 NA coding upstream 360498 46512536 ~ 46512590 (+)
LOC110524064 NA coding downstream 357066 47243857 ~ 47246448 (+)
LOC110520864 NA coding downstream 369802 47227246 ~ 47260224 (+)
lamb4 lamb4 coding downstream 429507 47316298 ~ 47339999 (+)
LOC110524092 LOC106573246 coding downstream 453375 47340166 ~ 47381610 (+)
LOC110524097 LOC106573247 coding downstream 496822 47383613 ~ 47401144 (+)
G50672 NA non-coding upstream 34656 46837786 ~ 46838432 (+)
G50661 NA non-coding upstream 63649 46807346 ~ 46809439 (+)
G50645 NA non-coding upstream 94689 46778167 ~ 46778399 (+)
G50642 NA non-coding upstream 100043 46772740 ~ 46773045 (+)
G50633 NA non-coding upstream 113970 46758813 ~ 46759118 (+)
G50674 LOC106573279 non-coding downstream 46698 46933489 ~ 47188884 (+)
G50728 NA non-coding downstream 90583 46977374 ~ 46982374 (+)
G50695 LOC106573279 non-coding downstream 133075 47019866 ~ 47124997 (+)
G50741 NA non-coding downstream 145258 47032049 ~ 47060720 (+)
G50746 NA non-coding downstream 167555 47054346 ~ 47104348 (+)
G50010 LOC106573227 other upstream 880197 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1136308 45730241 ~ 45736780 (+)
G49142 NA other upstream 1454908 45414706 ~ 45418180 (+)
G48976 NA other upstream 1726448 45145278 ~ 45146640 (+)
G52080 NA other downstream 1119883 48006674 ~ 48024958 (+)
G52324 NA other downstream 1493751 48380542 ~ 48383257 (+)
G53181 NA other downstream 2006706 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 3150783 50037523 ~ 50184257 (+)

Expression


Co-expression Network