G50702


Basic Information

Item Value
gene id G50702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46874200 ~ 46921807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56649
taacattaggggtactaaatgcccagtcaagcGCAAACGCATTCTGTATTATCTAAAGCAACATAAGGTTGATATAGCTCTTCTTCAGGAGACACACCTGACTGACTCTGAGCATGATAAACTGAAGAGAATGGGTGGGCCAAGTGTACTATTCATCTTTCACCTCTCGGGCAAGAGGGGTGGCCATACTCATTAATAAGCATTGCCCCTTTCAGATACAATCTCAGAATAAAGACAAAGGGGGAAGGTTTGTGATCATTCAAGGTTTCATTAATATTGAGCCCACTACCATTGTGATTGTGAATGGTCCTAACCATGATGATCCTACATTTTACAAAGACATCTTTTTAAAGTTAATATGCCCATCATCAGAGATAATAATGGCAGGGGATTTTAACTTGGTACTGGACCCTTCCAGTGATAGATCTTCCTCTAATAGTATCAACCTCACACAGGAAGCTAAAATGTTAAAAGCAGAAATTAAACACTTTGGACTCGTAGACTTATGGAGATTTCACAACCAAAGGGTTAAAGAATACTCATTTTACTCCCCTGTCCATAACAATTACTCTAGAAGAGACTTATTTCTTATTCCTGCAGCCAGGGGAAGTTTAACTACTGGGTGTAAGTACTTACCAAGATGTATATCAGATCATTCTGCCCTGCTGGCTTCAGTACCCGTCAGTAGAGCACAGCCACCCTCAAGAAGATGGAGGTTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107385925

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56649 True 719 lncRNA 0.40 2 46874200 46921807

Neighbor

gene id symbol gene type direction distance location
LOC110524042 NA coding upstream 12735 46854230 ~ 46861465 (+)
LOC110524021 LOC106573242 coding upstream 64184 46798486 ~ 46810016 (+)
LOC110524008 LOC106573239 coding upstream 137337 46632435 ~ 46736863 (+)
LOC110524001 mppd2 coding upstream 298259 46525358 ~ 46575941 (+)
LOC118966744 NA coding upstream 361610 46512536 ~ 46512590 (+)
LOC110524064 NA coding downstream 322050 47243857 ~ 47246448 (+)
LOC110520864 NA coding downstream 334786 47227246 ~ 47260224 (+)
lamb4 lamb4 coding downstream 394491 47316298 ~ 47339999 (+)
LOC110524092 LOC106573246 coding downstream 418359 47340166 ~ 47381610 (+)
LOC110524097 LOC106573247 coding downstream 461806 47383613 ~ 47401144 (+)
G50672 NA non-coding upstream 35768 46837786 ~ 46838432 (+)
G50661 NA non-coding upstream 64761 46807346 ~ 46809439 (+)
G50645 NA non-coding upstream 95801 46778167 ~ 46778399 (+)
G50642 NA non-coding upstream 101155 46772740 ~ 46773045 (+)
G50633 NA non-coding upstream 115082 46758813 ~ 46759118 (+)
G50674 LOC106573279 non-coding downstream 11682 46933489 ~ 47188884 (+)
G50728 NA non-coding downstream 55567 46977374 ~ 46982374 (+)
G50695 LOC106573279 non-coding downstream 98059 47019866 ~ 47124997 (+)
G50741 NA non-coding downstream 110242 47032049 ~ 47060720 (+)
G50746 NA non-coding downstream 132539 47054346 ~ 47104348 (+)
G50010 LOC106573227 other upstream 881309 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1137420 45730241 ~ 45736780 (+)
G49142 NA other upstream 1456020 45414706 ~ 45418180 (+)
G48976 NA other upstream 1727560 45145278 ~ 45146640 (+)
G52080 NA other downstream 1084867 48006674 ~ 48024958 (+)
G52324 NA other downstream 1458735 48380542 ~ 48383257 (+)
G53181 NA other downstream 1971690 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 3115767 50037523 ~ 50184257 (+)

Expression


Co-expression Network