Gene
RNA
| Item | Value |
|---|---|
| gene id | G51165 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 46924028 ~ 46967388 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| WD repeat-containing protein 3 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU57175 | True | 758 | lncRNA | 0.47 | 2 | 46924028 | 46967388 |
46,900,000
46,910,000
46,920,000
46,930,000
46,940,000
46,950,000
46,960,000
46,970,000
46,980,000
46,990,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964698 | NA | coding | downstream | 21635 | 46901321 ~ 46902393 (-) |
| LOC110524028 | LOC106561496 | coding | downstream | 84475 | 46817056 ~ 46839553 (-) |
| LOC110524015 | LOC106573241 | coding | downstream | 180995 | 46737435 ~ 46743033 (-) |
| tcp11l1 | tcp11l1 | coding | downstream | 826921 | 46085582 ~ 46097107 (-) |
| LOC110523921 | LOC106573228 | coding | downstream | 847287 | 46025778 ~ 46076741 (-) |
| LOC118964694 | NA | coding | upstream | 5381 | 46972769 ~ 46974689 (-) |
| LOC118964693 | NA | coding | upstream | 70031 | 47037419 ~ 47038580 (-) |
| LOC118964691 | NA | coding | upstream | 123850 | 47091238 ~ 47093901 (-) |
| LOC118964692 | NA | coding | upstream | 150466 | 47117854 ~ 47119664 (-) |
| LOC118964699 | NA | coding | upstream | 177034 | 47144422 ~ 47145496 (-) |
| G51160 | NA | non-coding | downstream | 12069 | 46900164 ~ 46911959 (-) |
| G51149 | NA | non-coding | downstream | 66330 | 46853827 ~ 46857698 (-) |
| G51123 | NA | non-coding | downstream | 109203 | 46814594 ~ 46814825 (-) |
| G51122 | NA | non-coding | downstream | 109653 | 46813954 ~ 46814375 (-) |
| G51175 | NA | non-coding | upstream | 1057 | 46968445 ~ 46969145 (-) |
| G51181 | NA | non-coding | upstream | 10069 | 46977457 ~ 46982373 (-) |
| G51184 | NA | non-coding | upstream | 23560 | 46990948 ~ 47045352 (-) |
| G51193 | NA | non-coding | upstream | 47916 | 47015304 ~ 47067386 (-) |
| G51209 | NA | non-coding | upstream | 78815 | 47046203 ~ 47096286 (-) |
| G49962 | NA | other | downstream | 974077 | 45948958 ~ 45949951 (-) |
| G49774 | NA | other | downstream | 1202904 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 3794999 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 7902003 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 8732292 | 38187488 ~ 38191736 (-) |
| G51214 | NA | other | upstream | 97386 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 321551 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 410253 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 574988 | 47541224 ~ 47561223 (-) |
| LOC110524264 | LOC106573263 | other | upstream | 1326720 | 48291626 ~ 48304829 (-) |
