G50728


Basic Information

Item Value
gene id G50728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46977374 ~ 46982374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56677
tctgtcctttcctttcaccctgtctccctctgctggtcgtattaggttaccttttctcccccgctttcccccagctgtcccttgtctcctcctaactacctcgtcaccccttttcccacctgttccctttttccctctgattagtcctctatatctctctctgtttttgttcctgtccttgtcggattcttgtttgtgttgttcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacgtttgttttgctattaaagaagctctgtttacgttaagtcgcttttgggtcctcattcactcaccgtaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56677 True 354 lncRNA 0.48 2 46977374 46982374

Neighbor

gene id symbol gene type direction distance location
LOC110524042 NA coding upstream 115909 46854230 ~ 46861465 (+)
LOC110524021 LOC106573242 coding upstream 167358 46798486 ~ 46810016 (+)
LOC110524008 LOC106573239 coding upstream 240511 46632435 ~ 46736863 (+)
LOC110524001 mppd2 coding upstream 401433 46525358 ~ 46575941 (+)
LOC118966744 NA coding upstream 464784 46512536 ~ 46512590 (+)
LOC110524064 NA coding downstream 261483 47243857 ~ 47246448 (+)
LOC110520864 NA coding downstream 274219 47227246 ~ 47260224 (+)
lamb4 lamb4 coding downstream 333924 47316298 ~ 47339999 (+)
LOC110524092 LOC106573246 coding downstream 357792 47340166 ~ 47381610 (+)
LOC110524097 LOC106573247 coding downstream 401239 47383613 ~ 47401144 (+)
G50702 NA non-coding upstream 55567 46874200 ~ 46921807 (+)
G50701 NA non-coding upstream 90583 46873088 ~ 46886791 (+)
G50672 NA non-coding upstream 138942 46837786 ~ 46838432 (+)
G50661 NA non-coding upstream 167935 46807346 ~ 46809439 (+)
G50645 NA non-coding upstream 198975 46778167 ~ 46778399 (+)
G50695 LOC106573279 non-coding downstream 37492 47019866 ~ 47124997 (+)
G50741 NA non-coding downstream 49675 47032049 ~ 47060720 (+)
G50746 NA non-coding downstream 71972 47054346 ~ 47104348 (+)
G50765 NA non-coding downstream 177860 47160234 ~ 47221869 (+)
G50759 NA non-coding downstream 232346 47214720 ~ 47239007 (+)
G50010 LOC106573227 other upstream 984483 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1240594 45730241 ~ 45736780 (+)
G49142 NA other upstream 1559194 45414706 ~ 45418180 (+)
G48976 NA other upstream 1830734 45145278 ~ 45146640 (+)
G52080 NA other downstream 1024300 48006674 ~ 48024958 (+)
G52324 NA other downstream 1398168 48380542 ~ 48383257 (+)
G53181 NA other downstream 1911123 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 3055200 50037523 ~ 50184257 (+)

Expression


Co-expression Network