G50759


Basic Information

Item Value
gene id G50759
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47214720 ~ 47239007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56715
TAGACAATTTGGGTTTGTAGCTTACACCGTCAGTATCAGTGACGTGTTCAGTGCAGCTACTTGAATGGTCTGTAGACTTGCTGACACAAAAGTAGCTTATGGCAGGTTAAGACTCTAACTAGCAACCTAACCTCTCAGCAATCAGGTTCACTACCTGCACACAGACCAAACAGCCTAGTGATAGTAACAGCCATCTCTTACTATAGGCACTCAGctactctcaccatctctctttctctctcataacAGGCCTTTTTTAAATTCTATTCacatttaccctccactagaCCCCTGGTTTCACAAGGTGGAATAAAATGTACTGATAATAAGTGATTTCAGCTTTGTACTGCTGTGAAGACGTAGGCCGTTACATCAAGATTGATCTATTTGCAAAAAGCCTGTAATAAACTTGGGTAGCTGATGGATAACTGATGTTCATATCTTAAAGGACAAGTCCCTATAAGCTTTTGTCAGGAATCAGGACTAGGTTAATAAATCCAACGCAACTGCATGTTTTAAAAATGGTAGGATATCTTACGTTAGGCCTAGTTATAAAATGGCATTATAGGCCGACACTGTACAGTGTTTAGGCCTATTCTTTTGCCGGATTGGAGAATGTCTGCAATTGTCTTGCCTAGTGCAGCAAAACTGCCAAAACATGGCCTGGTCATGGATGAAAGCATCTGTTCAAAATGGGGTAGAACTGagggaacatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56715 True 717 lncRNA 0.43 2 47214720 47239007

Neighbor

gene id symbol gene type direction distance location
LOC110524042 NA coding upstream 353255 46854230 ~ 46861465 (+)
LOC110524021 LOC106573242 coding upstream 404704 46798486 ~ 46810016 (+)
LOC110524008 LOC106573239 coding upstream 477857 46632435 ~ 46736863 (+)
LOC110524001 mppd2 coding upstream 638779 46525358 ~ 46575941 (+)
LOC118966744 NA coding upstream 702130 46512536 ~ 46512590 (+)
LOC110524064 NA coding downstream 4850 47243857 ~ 47246448 (+)
LOC110520864 NA coding downstream 17586 47227246 ~ 47260224 (+)
lamb4 lamb4 coding downstream 77291 47316298 ~ 47339999 (+)
LOC110524092 LOC106573246 coding downstream 101159 47340166 ~ 47381610 (+)
LOC110524097 LOC106573247 coding downstream 144606 47383613 ~ 47401144 (+)
G50674 LOC106573279 non-coding upstream 25836 46933489 ~ 47188884 (+)
G50695 LOC106573279 non-coding upstream 89723 47019866 ~ 47124997 (+)
G50746 NA non-coding upstream 110372 47054346 ~ 47104348 (+)
G50741 NA non-coding upstream 154000 47032049 ~ 47060720 (+)
G50728 NA non-coding upstream 232346 46977374 ~ 46982374 (+)
G50682 NA non-coding downstream 7861 47246868 ~ 47247246 (+)
LOC110524112 LOC106573249 non-coding downstream 191749 47430652 ~ 47579162 (+)
G51442 NA non-coding downstream 349016 47588023 ~ 47629944 (+)
G51503 NA non-coding downstream 449647 47688654 ~ 47691037 (+)
G50010 LOC106573227 other upstream 1221829 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1477940 45730241 ~ 45736780 (+)
G49142 NA other upstream 1796540 45414706 ~ 45418180 (+)
G48976 NA other upstream 2068080 45145278 ~ 45146640 (+)
G52080 NA other downstream 767667 48006674 ~ 48024958 (+)
G52324 NA other downstream 1141535 48380542 ~ 48383257 (+)
G53181 NA other downstream 1654490 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 2798567 50037523 ~ 50184257 (+)
LOC110524575 fgf3 other downstream 4210815 51449353 ~ 51451460 (+)

Expression


Co-expression Network