G50682


Basic Information

Item Value
gene id G50682
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47246868 ~ 47247246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56622
ctggctccaggtcatctataagtctttgctaggtaaagccctgccttatctcagctcactggtcaccatagcagcacccacccgtagcacgcgctccagcaggtatatttcactggttacccccaaagccaattcctccttcggtcgcctttccttccagttctctgctgccaatgactggaacgaactgcaaaaatcactgaagctggagactcatatctccctcactagctttaagcaccagctgtccgagcagctcatcATACTGTTATCTAattgatttattttgctcctttgcaccccagtatctctacttgtaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56622 True 321 lncRNA 0.49 2 47246868 47247246

Neighbor

gene id symbol gene type direction distance location
LOC110524064 NA coding upstream 420 47243857 ~ 47246448 (+)
LOC110524042 NA coding upstream 385403 46854230 ~ 46861465 (+)
LOC110524021 LOC106573242 coding upstream 436852 46798486 ~ 46810016 (+)
LOC110524008 LOC106573239 coding upstream 510005 46632435 ~ 46736863 (+)
LOC110524001 mppd2 coding upstream 670927 46525358 ~ 46575941 (+)
LOC110520864 NA coding downstream 9347 47227246 ~ 47260224 (+)
lamb4 lamb4 coding downstream 69052 47316298 ~ 47339999 (+)
LOC110524092 LOC106573246 coding downstream 92920 47340166 ~ 47381610 (+)
LOC110524097 LOC106573247 coding downstream 136367 47383613 ~ 47401144 (+)
LOC110524112 LOC106573249 coding downstream 183406 47430652 ~ 47579162 (+)
G50759 NA non-coding upstream 7861 47214720 ~ 47239007 (+)
G50765 NA non-coding upstream 24999 47160234 ~ 47221869 (+)
G50674 LOC106573279 non-coding upstream 57984 46933489 ~ 47188884 (+)
G50695 LOC106573279 non-coding upstream 121871 47019866 ~ 47124997 (+)
G50746 NA non-coding upstream 142520 47054346 ~ 47104348 (+)
G51442 NA non-coding downstream 340777 47588023 ~ 47629944 (+)
G51503 NA non-coding downstream 441408 47688654 ~ 47691037 (+)
G51520 NA non-coding downstream 472665 47719911 ~ 47775018 (+)
G50010 LOC106573227 other upstream 1253977 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1510088 45730241 ~ 45736780 (+)
G49142 NA other upstream 1828688 45414706 ~ 45418180 (+)
G48976 NA other upstream 2100228 45145278 ~ 45146640 (+)
G52080 NA other downstream 759428 48006674 ~ 48024958 (+)
G52324 NA other downstream 1133296 48380542 ~ 48383257 (+)
G53181 NA other downstream 1646251 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 2790328 50037523 ~ 50184257 (+)
LOC110524575 fgf3 other downstream 4202576 51449353 ~ 51451460 (+)

Expression


Co-expression Network