G51285 (LOC106561952)


Basic Information

Item Value
gene id G51285
gene name LOC106561952
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47288939 ~ 47289681 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU57327
CTGCATATTGAAGTGGGTGAAGACAAAATTCACGCCACTCACCAAACCAGAGGTGCGCAAGTTGATCATCTTCAGTGACAGATGCTGTGGGCAGAATAACAACTGGCGGATGCTTAATCTGATGTCGATGCTCGTCTCTATGGTTTACTTTACCCAAGTTAAGCAGAAGTTCATGGTCTCTGGTCATTCTTTTCTTCCTTGTGATCGATCTTTTGCCACCATCGAGAAGAGGCGCAAGGTGTCAGTCCTTCATACACCTGATGATGTTTCAAAGATGATACTTGAAGCACAACCAGCAAAACCATTCAAGGTGATGAGGATGCAATGTGAAGACTTCAGGCACCTCCCAGATTCTGTCCTCAAGCGACCAGCTGGACTACAGATCACCTCAGTGACGTGGTTAAAAGTCACAGTTGAGGATCCTTGGAATCTGTACGCCAGACAGAGCCACAGTCTATTTGAGGGATGGAAGTCGTGGCTGATCTCCAAACCAAAACAAGGAGCTACACCTCAACCTCCCTATTTTGCAAGCCACTACCCTAGAGCATATGAGAGTCCTCTGCCCATCAAAAAAAACAAGTACCAAGATCTGATGACCATGCTCAAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106561952 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57327 True 607 TUCP 0.46 2 47288939 47289681

Neighbor

gene id symbol gene type direction distance location
LOC110524061 LOC106573279 coding downstream 45733 47142524 ~ 47286344 (-)
LOC118964701 NA coding downstream 57353 47230903 ~ 47231586 (-)
LOC118964696 NA coding downstream 81018 47206503 ~ 47207921 (-)
LOC118964695 NA coding downstream 116249 47171414 ~ 47172690 (-)
LOC118964699 NA coding downstream 143443 47144422 ~ 47145496 (-)
LOC110524104 LOC106573248 coding upstream 251543 47541224 ~ 47561223 (-)
LOC118964710 NA coding upstream 307023 47596704 ~ 47604280 (-)
LOC110524125 LOC106573250 coding upstream 344199 47633880 ~ 47689066 (-)
LOC110524148 LOC106573251 coding upstream 405501 47695182 ~ 47722400 (-)
LOC110532355 faap24 coding upstream 435932 47725613 ~ 47733539 (-)
G51277 NA non-coding downstream 12591 47275397 ~ 47276348 (-)
G51261 NA non-coding downstream 34184 47253034 ~ 47254755 (-)
G51214 NA non-coding downstream 52314 47064774 ~ 47236625 (-)
G51246 NA non-coding downstream 69420 47189796 ~ 47219519 (-)
G51652 NA non-coding upstream 93977 47383658 ~ 47384488 (-)
G51802 NA non-coding upstream 399439 47689120 ~ 47690770 (-)
G51899 LOC106573253 non-coding upstream 516873 47806554 ~ 47806900 (-)
G51914 NA non-coding upstream 537287 47826968 ~ 47830052 (-)
G51977 NA non-coding upstream 601797 47891478 ~ 47891884 (-)
G49962 NA other downstream 1338988 45948958 ~ 45949951 (-)
G49774 NA other downstream 1567815 45720805 ~ 45721124 (-)
tspan9a LOC106573177 other downstream 4159910 42852829 ~ 43129052 (-)
G41868 NA other downstream 8266914 39021805 ~ 39022025 (-)
G51649 LOC106573246 other upstream 87960 47377641 ~ 47378543 (-)
LOC110524264 LOC106573263 other upstream 1004427 48291626 ~ 48304829 (-)
LOC110532382 LOC106573120 other upstream 1694504 48971580 ~ 49044257 (-)
G55408 NA other upstream 3121953 50411634 ~ 50412128 (-)

Expression


Co-expression Network