G51649 (LOC106573246)


Basic Information

Item Value
gene id G51649
gene name LOC106573246
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47377641 ~ 47378543 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU57725
tgactCTGCGTGCCTGCTCCAGTAGGCTCTCAGCTCTCTGGATGTCGTCGGAGCTCTGGTTAAGGATGGTCTCCACGTGGGCTAGGTCTCCTACTCTCTCCCTGATCTCGTCTGTCAGGGTTTGGAGCTGGGCTGGTGTGGTGGGCATCTGCATGGCCAGCACCTCGTTGGCCACTGCCTCAATGCTCTCCAGGTCCGCTGCATCCTGTGTGAGGAAGTCTCTGATCTGTCGGATGAGGCTGCGCAGCTCCTCGTTGCTCTGGTCCACACGCTGCTTGGTACCGTTGGTCTTCAGCAGCACGTTCTGGGCACTCAGCTTAGCCTCATCCGCCTTCACCTTGGCCTCCGACACCATTTTGGCGAGCTTGTCCACTTCCTCCATGGCCGTGAGGATCTCCTGGTCAAAGTCCTTGGCCTTCTGCCAGGCGTTATTGGCCAGGGTGACCAGACCGCCGCACCCTTCGCCACCGCACCTCCTGTTCCCCTCGAAGTCCACACAGCTCAACCCCCCACACGGAGAGTCCACACATGACGCATCAGCTGGGCTGCCACACGTCTGCAGAGAAAGGACCAG

Function

NR:

description
laminin subunit beta-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57725 True 574 TUCP 0.60 3 47377641 47378543

Neighbor

gene id symbol gene type direction distance location
LOC110524061 LOC106573279 coding downstream 134435 47142524 ~ 47286344 (-)
LOC118964701 NA coding downstream 146055 47230903 ~ 47231586 (-)
LOC118964696 NA coding downstream 169720 47206503 ~ 47207921 (-)
LOC118964695 NA coding downstream 204951 47171414 ~ 47172690 (-)
LOC118964699 NA coding downstream 232145 47144422 ~ 47145496 (-)
LOC110524104 LOC106573248 coding upstream 162681 47541224 ~ 47561223 (-)
LOC118964710 NA coding upstream 218161 47596704 ~ 47604280 (-)
LOC110524125 LOC106573250 coding upstream 255337 47633880 ~ 47689066 (-)
LOC110524148 LOC106573251 coding upstream 316639 47695182 ~ 47722400 (-)
LOC110532355 faap24 coding upstream 347070 47725613 ~ 47733539 (-)
G51277 NA non-coding downstream 101293 47275397 ~ 47276348 (-)
G51261 NA non-coding downstream 122886 47253034 ~ 47254755 (-)
G51214 NA non-coding downstream 141016 47064774 ~ 47236625 (-)
G51246 NA non-coding downstream 158122 47189796 ~ 47219519 (-)
G51652 NA non-coding upstream 5115 47383658 ~ 47384488 (-)
G51802 NA non-coding upstream 310577 47689120 ~ 47690770 (-)
G51899 LOC106573253 non-coding upstream 428011 47806554 ~ 47806900 (-)
G51914 NA non-coding upstream 448425 47826968 ~ 47830052 (-)
G51977 NA non-coding upstream 512935 47891478 ~ 47891884 (-)
G51285 LOC106561952 other downstream 87960 47288939 ~ 47289681 (-)
G49962 NA other downstream 1427690 45948958 ~ 45949951 (-)
G49774 NA other downstream 1656517 45720805 ~ 45721124 (-)
tspan9a LOC106573177 other downstream 4248612 42852829 ~ 43129052 (-)
LOC110524264 LOC106573263 other upstream 915565 48291626 ~ 48304829 (-)
LOC110532382 LOC106573120 other upstream 1605642 48971580 ~ 49044257 (-)
G55408 NA other upstream 3033091 50411634 ~ 50412128 (-)
G55627 NA other upstream 3386820 50765363 ~ 50767431 (-)

Expression


Co-expression Network