G51520


Basic Information

Item Value
gene id G51520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47719911 ~ 47775018 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU57579
gttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactGTATCTAGCTATAAGTTAACCCGGATCACTCAAATTTATATTTGTAAGCAATTATGGTAAATCCAACTGCCCTTAACTAGGTGTcttcactagacagagagagacccacaaagatagagagagaggaagaaagtgagaaagaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57579 True 227 lncRNA 0.40 2 47719911 47775018

Neighbor

gene id symbol gene type direction distance location
LOC110524112 LOC106573249 coding upstream 140749 47430652 ~ 47579162 (+)
LOC110524097 LOC106573247 coding upstream 318767 47383613 ~ 47401144 (+)
LOC110524092 LOC106573246 coding upstream 338301 47340166 ~ 47381610 (+)
lamb4 lamb4 coding upstream 379912 47316298 ~ 47339999 (+)
LOC110520864 NA coding upstream 459687 47227246 ~ 47260224 (+)
LOC110520968 LOC106573253 coding downstream 14049 47789067 ~ 47824464 (+)
LOC110524181 LOC106573253 coding downstream 49518 47824536 ~ 47853332 (+)
rpgrip1l rpgrip1l coding downstream 174447 47949465 ~ 47978305 (+)
LOC110524199 LOC106573256 coding downstream 208028 47983046 ~ 48013346 (+)
LOC118964788 NA coding downstream 372381 48147399 ~ 48163741 (+)
G51503 NA non-coding upstream 28874 47688654 ~ 47691037 (+)
G51442 NA non-coding upstream 89967 47588023 ~ 47629944 (+)
G50682 NA non-coding upstream 472665 47246868 ~ 47247246 (+)
G51946 NA non-coding downstream 98515 47873533 ~ 47874484 (+)
G51983 NA non-coding downstream 120809 47895827 ~ 47896045 (+)
G52034 NA non-coding downstream 150942 47925960 ~ 47926333 (+)
G52048 NA non-coding downstream 161370 47936388 ~ 47936693 (+)
LOC110524042 NA other upstream 858447 46854230 ~ 46861465 (+)
G50010 LOC106573227 other upstream 1727020 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1983131 45730241 ~ 45736780 (+)
G49142 NA other upstream 2301731 45414706 ~ 45418180 (+)
G52080 NA other downstream 231656 48006674 ~ 48024958 (+)
G52324 NA other downstream 605524 48380542 ~ 48383257 (+)
G53181 NA other downstream 1118479 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 2262556 50037523 ~ 50184257 (+)
LOC110524575 fgf3 other downstream 3674804 51449353 ~ 51451460 (+)

Expression


Co-expression Network