G51946


Basic Information

Item Value
gene id G51946
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47873533 ~ 47874484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU58040
gggggagtctatatacattgtgtgcaaaaggcatgaggaggtaggcgaataattacaattttgcagattaacactggagtgataaacgatcagatggtcatgtacaggtacagatattggtgtgcaaaagagcagaaaagtaaataaataaaaacagtatggggatgaggtaggtgaaaatgggtgggctatttaccaatagactatgtacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58040 True 213 lncRNA 0.39 2 47873533 47874484

Neighbor

gene id symbol gene type direction distance location
LOC110524181 LOC106573253 coding upstream 22374 47824536 ~ 47853332 (+)
LOC110520968 LOC106573253 coding upstream 49069 47789067 ~ 47824464 (+)
LOC110524160 LOC106573252 coding upstream 103724 47733556 ~ 47769809 (+)
LOC110524112 LOC106573249 coding upstream 294371 47430652 ~ 47579162 (+)
LOC110524097 LOC106573247 coding upstream 472389 47383613 ~ 47401144 (+)
rpgrip1l rpgrip1l coding downstream 74981 47949465 ~ 47978305 (+)
LOC110524199 LOC106573256 coding downstream 108562 47983046 ~ 48013346 (+)
LOC118964788 NA coding downstream 272915 48147399 ~ 48163741 (+)
LOC110524253 LOC106573262 coding downstream 382383 48256867 ~ 48289561 (+)
LOC110524291 LOC106573129 coding downstream 609401 48483885 ~ 48510535 (+)
G51520 NA non-coding upstream 98515 47719911 ~ 47775018 (+)
G51503 NA non-coding upstream 182496 47688654 ~ 47691037 (+)
G51442 NA non-coding upstream 243589 47588023 ~ 47629944 (+)
G51983 NA non-coding downstream 21343 47895827 ~ 47896045 (+)
G52034 NA non-coding downstream 51476 47925960 ~ 47926333 (+)
G52048 NA non-coding downstream 61904 47936388 ~ 47936693 (+)
G52063 NA non-coding downstream 69986 47944470 ~ 47944802 (+)
G52086 NA non-coding downstream 149846 48024330 ~ 48030842 (+)
LOC110520864 NA other upstream 614635 47227246 ~ 47260224 (+)
LOC110524042 NA other upstream 1012069 46854230 ~ 46861465 (+)
G50010 LOC106573227 other upstream 1880642 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 2136753 45730241 ~ 45736780 (+)
G49142 NA other upstream 2455353 45414706 ~ 45418180 (+)
G52080 NA other downstream 132190 48006674 ~ 48024958 (+)
G52324 NA other downstream 506058 48380542 ~ 48383257 (+)
G53181 NA other downstream 1019013 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 2163090 50037523 ~ 50184257 (+)
LOC110524575 fgf3 other downstream 3575338 51449353 ~ 51451460 (+)

Expression


Co-expression Network