Gene
RNA
| Item | Value |
|---|---|
| gene id | G52017 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 47914948 ~ 47915246 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU58111 | True | 299 | lncRNA | 0.37 | 1 | 47914948 | 47915246 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524174 | LOC106573254 | coding | downstream | 126655 | 47785638 ~ 47788293 (-) |
| LOC110532355 | faap24 | coding | downstream | 181409 | 47725613 ~ 47733539 (-) |
| LOC110524148 | LOC106573251 | coding | downstream | 192548 | 47695182 ~ 47722400 (-) |
| LOC110524125 | LOC106573250 | coding | downstream | 225882 | 47633880 ~ 47689066 (-) |
| LOC118964710 | NA | coding | downstream | 310668 | 47596704 ~ 47604280 (-) |
| LOC110524205 | LOC106573257 | coding | upstream | 128246 | 48043492 ~ 48049196 (-) |
| LOC110524212 | LOC106573258 | coding | upstream | 156583 | 48071829 ~ 48123356 (-) |
| LOC110524242 | NA | coding | upstream | 304194 | 48219440 ~ 48247048 (-) |
| LOC110524264 | LOC106573263 | coding | upstream | 376380 | 48291626 ~ 48304829 (-) |
| LOC110524273 | LOC106573264 | coding | upstream | 398419 | 48313665 ~ 48396381 (-) |
| G51993 | NA | non-coding | downstream | 13367 | 47901229 ~ 47901581 (-) |
| G51977 | NA | non-coding | downstream | 23064 | 47891478 ~ 47891884 (-) |
| G51914 | NA | non-coding | downstream | 84896 | 47826968 ~ 47830052 (-) |
| G51899 | LOC106573253 | non-coding | downstream | 108048 | 47806554 ~ 47806900 (-) |
| G51802 | NA | non-coding | downstream | 224178 | 47689120 ~ 47690770 (-) |
| G52033 | NA | non-coding | upstream | 10088 | 47925334 ~ 47925952 (-) |
| G52630 | rpgrip1l | non-coding | upstream | 50145 | 47965391 ~ 47965788 (-) |
| G52674 | NA | non-coding | upstream | 110068 | 48025314 ~ 48031630 (-) |
| G52690 | NA | non-coding | upstream | 126386 | 48041632 ~ 48041867 (-) |
| G52691 | NA | non-coding | upstream | 126796 | 48042042 ~ 48042340 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 353739 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 536405 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 625267 | 47288939 ~ 47289681 (-) |
| G51214 | NA | other | downstream | 795915 | 47064774 ~ 47236625 (-) |
| G49962 | NA | other | downstream | 1964997 | 45948958 ~ 45949951 (-) |
| LOC110532382 | LOC106573120 | other | upstream | 1068939 | 48971580 ~ 49044257 (-) |
| G55408 | NA | other | upstream | 2496388 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 2850117 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 2862501 | 50777716 ~ 50792069 (-) |
