G52107


Basic Information

Item Value
gene id G52107
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 48055129 ~ 48055350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU58206
ctgtgATAGGGCTGATTATCACAAGTGAGCAGTGTGTTAAATGGCTTATAACTCCATGTTGAAATAAGataacactacatgaccaaaaatatgttgacacctgctcattgaacatctcattccaaaatcatgtcatttatatggagttggtcccccctttgctgctacaacagcctccactcttctgggaaggctttccactacatgttggaacattgctgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58206 True 222 lncRNA 0.49 1 48055129 48055350

Neighbor

gene id symbol gene type direction distance location
LOC110524199 LOC106573256 coding upstream 41783 47983046 ~ 48013346 (+)
rpgrip1l rpgrip1l coding upstream 76824 47949465 ~ 47978305 (+)
LOC110524181 LOC106573253 coding upstream 203970 47824536 ~ 47853332 (+)
LOC110520968 LOC106573253 coding upstream 230665 47789067 ~ 47824464 (+)
LOC110524160 LOC106573252 coding upstream 285320 47733556 ~ 47769809 (+)
LOC118964788 NA coding downstream 92049 48147399 ~ 48163741 (+)
LOC110524253 LOC106573262 coding downstream 201517 48256867 ~ 48289561 (+)
LOC110524291 LOC106573129 coding downstream 428535 48483885 ~ 48510535 (+)
LOC110524302 LOC106573126 coding downstream 496731 48552081 ~ 48590914 (+)
LOC110524313 LOC106573128 coding downstream 535670 48591020 ~ 48596608 (+)
G52102 NA non-coding upstream 9389 48045503 ~ 48045740 (+)
G52101 NA non-coding upstream 10157 48044757 ~ 48044972 (+)
G52099 NA non-coding upstream 12779 48042047 ~ 48042350 (+)
G52086 NA non-coding upstream 24287 48024330 ~ 48030842 (+)
G52063 NA non-coding upstream 110327 47944470 ~ 47944802 (+)
G52169 NA non-coding downstream 77915 48133265 ~ 48133465 (+)
G52174 NA non-coding downstream 83013 48138363 ~ 48138596 (+)
G52187 NA non-coding downstream 111264 48166614 ~ 48167114 (+)
G52148 NA non-coding downstream 117814 48173164 ~ 48187068 (+)
G52199 NA non-coding downstream 127334 48182684 ~ 48187583 (+)
G52080 NA other upstream 30171 48006674 ~ 48024958 (+)
LOC110520864 NA other upstream 796231 47227246 ~ 47260224 (+)
LOC110524042 NA other upstream 1193665 46854230 ~ 46861465 (+)
G50010 LOC106573227 other upstream 2062238 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 2318349 45730241 ~ 45736780 (+)
G52324 NA other downstream 325192 48380542 ~ 48383257 (+)
G53181 NA other downstream 838147 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 1982224 50037523 ~ 50184257 (+)
LOC110524575 fgf3 other downstream 3394472 51449353 ~ 51451460 (+)
LOC118936380 LOC106581842 other downstream 5610865 53632830 ~ 53705421 (+)

Expression


Co-expression Network