Gene
RNA
| Item | Value |
|---|---|
| gene id | G52169 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 48133265 ~ 48133465 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU58274 | True | 201 | lncRNA | 0.47 | 1 | 48133265 | 48133465 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524199 | LOC106573256 | coding | upstream | 119919 | 47983046 ~ 48013346 (+) |
| rpgrip1l | rpgrip1l | coding | upstream | 154960 | 47949465 ~ 47978305 (+) |
| LOC110524181 | LOC106573253 | coding | upstream | 282106 | 47824536 ~ 47853332 (+) |
| LOC110520968 | LOC106573253 | coding | upstream | 308801 | 47789067 ~ 47824464 (+) |
| LOC110524160 | LOC106573252 | coding | upstream | 363456 | 47733556 ~ 47769809 (+) |
| LOC118964788 | NA | coding | downstream | 13934 | 48147399 ~ 48163741 (+) |
| LOC110524253 | LOC106573262 | coding | downstream | 123402 | 48256867 ~ 48289561 (+) |
| LOC110524291 | LOC106573129 | coding | downstream | 350420 | 48483885 ~ 48510535 (+) |
| LOC110524302 | LOC106573126 | coding | downstream | 418616 | 48552081 ~ 48590914 (+) |
| LOC110524313 | LOC106573128 | coding | downstream | 457555 | 48591020 ~ 48596608 (+) |
| G52107 | NA | non-coding | upstream | 77915 | 48055129 ~ 48055350 (+) |
| G52102 | NA | non-coding | upstream | 87525 | 48045503 ~ 48045740 (+) |
| G52101 | NA | non-coding | upstream | 88293 | 48044757 ~ 48044972 (+) |
| G52099 | NA | non-coding | upstream | 90915 | 48042047 ~ 48042350 (+) |
| G52086 | NA | non-coding | upstream | 102423 | 48024330 ~ 48030842 (+) |
| G52174 | NA | non-coding | downstream | 4898 | 48138363 ~ 48138596 (+) |
| G52187 | NA | non-coding | downstream | 33149 | 48166614 ~ 48167114 (+) |
| G52148 | NA | non-coding | downstream | 39699 | 48173164 ~ 48187068 (+) |
| G52199 | NA | non-coding | downstream | 49219 | 48182684 ~ 48187583 (+) |
| G52200 | NA | non-coding | downstream | 50119 | 48183584 ~ 48188396 (+) |
| G52080 | NA | other | upstream | 108307 | 48006674 ~ 48024958 (+) |
| LOC110520864 | NA | other | upstream | 874367 | 47227246 ~ 47260224 (+) |
| LOC110524042 | NA | other | upstream | 1271801 | 46854230 ~ 46861465 (+) |
| G50010 | LOC106573227 | other | upstream | 2140374 | 45992273 ~ 45992891 (+) |
| G49335 | LOC106573225 | other | upstream | 2396485 | 45730241 ~ 45736780 (+) |
| G52324 | NA | other | downstream | 247077 | 48380542 ~ 48383257 (+) |
| G53181 | NA | other | downstream | 760032 | 48893497 ~ 48893912 (+) |
| LOC118964841 | NA | other | downstream | 1904109 | 50037523 ~ 50184257 (+) |
| LOC110524575 | fgf3 | other | downstream | 3316357 | 51449353 ~ 51451460 (+) |
| LOC118936380 | LOC106581842 | other | downstream | 5532750 | 53632830 ~ 53705421 (+) |
