Gene
RNA
| Item | Value |
|---|---|
| gene id | G52742 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 48138263 ~ 48138580 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU58897 | True | 318 | lncRNA | 0.54 | 1 | 48138263 | 48138580 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524212 | LOC106573258 | coding | downstream | 14907 | 48071829 ~ 48123356 (-) |
| LOC110524205 | LOC106573257 | coding | downstream | 89067 | 48043492 ~ 48049196 (-) |
| LOC110524174 | LOC106573254 | coding | downstream | 349970 | 47785638 ~ 47788293 (-) |
| LOC110532355 | faap24 | coding | downstream | 404724 | 47725613 ~ 47733539 (-) |
| LOC110524148 | LOC106573251 | coding | downstream | 415863 | 47695182 ~ 47722400 (-) |
| LOC110524242 | NA | coding | upstream | 80860 | 48219440 ~ 48247048 (-) |
| LOC110524264 | LOC106573263 | coding | upstream | 153046 | 48291626 ~ 48304829 (-) |
| LOC110524273 | LOC106573264 | coding | upstream | 175085 | 48313665 ~ 48396381 (-) |
| LOC110524285 | LOC106573130 | coding | upstream | 301667 | 48440247 ~ 48463655 (-) |
| nup160 | nup160 | coding | upstream | 459598 | 48598178 ~ 48623416 (-) |
| G52738 | NA | non-coding | downstream | 2755 | 48135250 ~ 48135508 (-) |
| G52736 | NA | non-coding | downstream | 4605 | 48133414 ~ 48133658 (-) |
| G52734 | NA | non-coding | downstream | 7208 | 48130822 ~ 48131055 (-) |
| G52694 | NA | non-coding | downstream | 84078 | 48049197 ~ 48054185 (-) |
| G52691 | NA | non-coding | downstream | 95923 | 48042042 ~ 48042340 (-) |
| G52743 | NA | non-coding | upstream | 3128 | 48141708 ~ 48159977 (-) |
| G52765 | NA | non-coding | upstream | 28708 | 48167288 ~ 48167540 (-) |
| G52774 | NA | non-coding | upstream | 44319 | 48182899 ~ 48187280 (-) |
| G52862 | NA | non-coding | upstream | 184759 | 48323339 ~ 48323599 (-) |
| G52863 | NA | non-coding | upstream | 186989 | 48325569 ~ 48325784 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 577054 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 759720 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 848582 | 47288939 ~ 47289681 (-) |
| G51214 | NA | other | downstream | 1019230 | 47064774 ~ 47236625 (-) |
| G49962 | NA | other | downstream | 2188312 | 45948958 ~ 45949951 (-) |
| LOC110532382 | LOC106573120 | other | upstream | 845605 | 48971580 ~ 49044257 (-) |
| G55408 | NA | other | upstream | 2273054 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 2626783 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 2639167 | 50777716 ~ 50792069 (-) |
