Gene
RNA
| Item | Value |
|---|---|
| gene id | G52200 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 48183584 ~ 48188396 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU58309 | True | 624 | lncRNA | 0.37 | 2 | 48183584 | 48188396 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964788 | NA | coding | upstream | 19843 | 48147399 ~ 48163741 (+) |
| LOC110524199 | LOC106573256 | coding | upstream | 170238 | 47983046 ~ 48013346 (+) |
| rpgrip1l | rpgrip1l | coding | upstream | 205279 | 47949465 ~ 47978305 (+) |
| LOC110524181 | LOC106573253 | coding | upstream | 332425 | 47824536 ~ 47853332 (+) |
| LOC110520968 | LOC106573253 | coding | upstream | 359120 | 47789067 ~ 47824464 (+) |
| LOC110524253 | LOC106573262 | coding | downstream | 68471 | 48256867 ~ 48289561 (+) |
| LOC110524291 | LOC106573129 | coding | downstream | 295489 | 48483885 ~ 48510535 (+) |
| LOC110524302 | LOC106573126 | coding | downstream | 363685 | 48552081 ~ 48590914 (+) |
| LOC110524313 | LOC106573128 | coding | downstream | 402624 | 48591020 ~ 48596608 (+) |
| cttnbp2 | cttnbp2 | coding | downstream | 447099 | 48635495 ~ 48706569 (+) |
| G52187 | NA | non-coding | upstream | 16470 | 48166614 ~ 48167114 (+) |
| G52174 | NA | non-coding | upstream | 44988 | 48138363 ~ 48138596 (+) |
| G52169 | NA | non-coding | upstream | 50119 | 48133265 ~ 48133465 (+) |
| G52107 | NA | non-coding | upstream | 128234 | 48055129 ~ 48055350 (+) |
| G52102 | NA | non-coding | upstream | 137844 | 48045503 ~ 48045740 (+) |
| G52222 | NA | non-coding | downstream | 31058 | 48219454 ~ 48221949 (+) |
| G52277 | NA | non-coding | downstream | 136183 | 48324579 ~ 48324812 (+) |
| G52284 | NA | non-coding | downstream | 144873 | 48333269 ~ 48333547 (+) |
| G52289 | NA | non-coding | downstream | 151864 | 48340260 ~ 48340842 (+) |
| G52292 | NA | non-coding | downstream | 154702 | 48343098 ~ 48343350 (+) |
| G52080 | NA | other | upstream | 158626 | 48006674 ~ 48024958 (+) |
| LOC110520864 | NA | other | upstream | 924686 | 47227246 ~ 47260224 (+) |
| LOC110524042 | NA | other | upstream | 1322120 | 46854230 ~ 46861465 (+) |
| G50010 | LOC106573227 | other | upstream | 2190693 | 45992273 ~ 45992891 (+) |
| G49335 | LOC106573225 | other | upstream | 2446804 | 45730241 ~ 45736780 (+) |
| G52324 | NA | other | downstream | 192146 | 48380542 ~ 48383257 (+) |
| G53181 | NA | other | downstream | 705101 | 48893497 ~ 48893912 (+) |
| LOC118964841 | NA | other | downstream | 1849178 | 50037523 ~ 50184257 (+) |
| LOC110524575 | fgf3 | other | downstream | 3261426 | 51449353 ~ 51451460 (+) |
| LOC118936380 | LOC106581842 | other | downstream | 5477819 | 53632830 ~ 53705421 (+) |
