Gene
RNA
| Item | Value |
|---|---|
| gene id | G52869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 48334715 ~ 48334927 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59039 | True | 213 | lncRNA | 0.55 | 1 | 48334715 | 48334927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524264 | LOC106573263 | coding | downstream | 29886 | 48291626 ~ 48304829 (-) |
| LOC110524242 | NA | coding | downstream | 87667 | 48219440 ~ 48247048 (-) |
| LOC110524212 | LOC106573258 | coding | downstream | 211359 | 48071829 ~ 48123356 (-) |
| LOC110524205 | LOC106573257 | coding | downstream | 285519 | 48043492 ~ 48049196 (-) |
| LOC110524174 | LOC106573254 | coding | downstream | 546422 | 47785638 ~ 47788293 (-) |
| LOC110524285 | LOC106573130 | coding | upstream | 105320 | 48440247 ~ 48463655 (-) |
| nup160 | nup160 | coding | upstream | 263251 | 48598178 ~ 48623416 (-) |
| LOC110532369 | LOC100136364 | coding | upstream | 372055 | 48706982 ~ 48748537 (-) |
| LOC110524343 | LOC106573121 | coding | upstream | 479878 | 48814805 ~ 48892487 (-) |
| LOC110524359 | capza2 | coding | upstream | 566675 | 48901602 ~ 48958061 (-) |
| G52863 | NA | non-coding | downstream | 8931 | 48325569 ~ 48325784 (-) |
| G52862 | NA | non-coding | downstream | 11116 | 48323339 ~ 48323599 (-) |
| G52774 | NA | non-coding | downstream | 147435 | 48182899 ~ 48187280 (-) |
| G52765 | NA | non-coding | downstream | 167175 | 48167288 ~ 48167540 (-) |
| G52743 | NA | non-coding | downstream | 174738 | 48141708 ~ 48159977 (-) |
| G52877 | NA | non-coding | upstream | 13754 | 48348681 ~ 48349043 (-) |
| G52879 | NA | non-coding | upstream | 16643 | 48351570 ~ 48351885 (-) |
| G52881 | NA | non-coding | upstream | 22579 | 48357506 ~ 48357742 (-) |
| G52922 | NA | non-coding | upstream | 76581 | 48411508 ~ 48464040 (-) |
| G52948 | NA | non-coding | upstream | 113503 | 48448430 ~ 48468499 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 773506 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 956172 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 1045034 | 47288939 ~ 47289681 (-) |
| G51214 | NA | other | downstream | 1215682 | 47064774 ~ 47236625 (-) |
| LOC110532382 | LOC106573120 | other | upstream | 649258 | 48971580 ~ 49044257 (-) |
| G55408 | NA | other | upstream | 2076707 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 2430436 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 2442820 | 50777716 ~ 50792069 (-) |
| G56372 | NA | other | upstream | 3065800 | 51400727 ~ 51412569 (-) |
