Gene
RNA
| Item | Value |
|---|---|
| gene id | G52879 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 48351570 ~ 48351885 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59049 | True | 316 | lncRNA | 0.66 | 1 | 48351570 | 48351885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524264 | LOC106573263 | coding | downstream | 46741 | 48291626 ~ 48304829 (-) |
| LOC110524242 | NA | coding | downstream | 104522 | 48219440 ~ 48247048 (-) |
| LOC110524212 | LOC106573258 | coding | downstream | 228214 | 48071829 ~ 48123356 (-) |
| LOC110524205 | LOC106573257 | coding | downstream | 302374 | 48043492 ~ 48049196 (-) |
| LOC110524174 | LOC106573254 | coding | downstream | 563277 | 47785638 ~ 47788293 (-) |
| LOC110524285 | LOC106573130 | coding | upstream | 88362 | 48440247 ~ 48463655 (-) |
| nup160 | nup160 | coding | upstream | 246293 | 48598178 ~ 48623416 (-) |
| LOC110532369 | LOC100136364 | coding | upstream | 355097 | 48706982 ~ 48748537 (-) |
| LOC110524343 | LOC106573121 | coding | upstream | 462920 | 48814805 ~ 48892487 (-) |
| LOC110524359 | capza2 | coding | upstream | 549717 | 48901602 ~ 48958061 (-) |
| G52877 | NA | non-coding | downstream | 2527 | 48348681 ~ 48349043 (-) |
| G52869 | NA | non-coding | downstream | 16643 | 48334715 ~ 48334927 (-) |
| G52863 | NA | non-coding | downstream | 25786 | 48325569 ~ 48325784 (-) |
| G52862 | NA | non-coding | downstream | 27971 | 48323339 ~ 48323599 (-) |
| G52774 | NA | non-coding | downstream | 164290 | 48182899 ~ 48187280 (-) |
| G52881 | NA | non-coding | upstream | 5621 | 48357506 ~ 48357742 (-) |
| G52922 | NA | non-coding | upstream | 59623 | 48411508 ~ 48464040 (-) |
| G52948 | NA | non-coding | upstream | 96545 | 48448430 ~ 48468499 (-) |
| G52956 | NA | non-coding | upstream | 117283 | 48469168 ~ 48510478 (-) |
| G52973 | LOC106573129 | non-coding | upstream | 143739 | 48495624 ~ 48499627 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 790361 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 973027 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 1061889 | 47288939 ~ 47289681 (-) |
| G51214 | NA | other | downstream | 1232537 | 47064774 ~ 47236625 (-) |
| LOC110532382 | LOC106573120 | other | upstream | 632300 | 48971580 ~ 49044257 (-) |
| G55408 | NA | other | upstream | 2059749 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 2413478 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 2425862 | 50777716 ~ 50792069 (-) |
| G56372 | NA | other | upstream | 3048842 | 51400727 ~ 51412569 (-) |
