Gene
RNA
| Item | Value |
|---|---|
| gene id | G52985 |
| gene name | LOC106573129 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 48505510 ~ 48506091 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59165 | True | 256 | lncRNA | 0.54 | 2 | 48505510 | 48506091 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524285 | LOC106573130 | coding | downstream | 41855 | 48440247 ~ 48463655 (-) |
| LOC110524273 | LOC106573264 | coding | downstream | 109129 | 48313665 ~ 48396381 (-) |
| LOC110524264 | LOC106573263 | coding | downstream | 200681 | 48291626 ~ 48304829 (-) |
| LOC110524242 | NA | coding | downstream | 258462 | 48219440 ~ 48247048 (-) |
| LOC110524212 | LOC106573258 | coding | downstream | 382154 | 48071829 ~ 48123356 (-) |
| nup160 | nup160 | coding | upstream | 92087 | 48598178 ~ 48623416 (-) |
| LOC110532369 | LOC100136364 | coding | upstream | 200891 | 48706982 ~ 48748537 (-) |
| LOC110524343 | LOC106573121 | coding | upstream | 308714 | 48814805 ~ 48892487 (-) |
| LOC110524359 | capza2 | coding | upstream | 395511 | 48901602 ~ 48958061 (-) |
| LOC110532382 | LOC106573120 | coding | upstream | 465489 | 48971580 ~ 49044257 (-) |
| G52973 | LOC106573129 | non-coding | downstream | 5883 | 48495624 ~ 48499627 (-) |
| G52948 | NA | non-coding | downstream | 37011 | 48448430 ~ 48468499 (-) |
| G52922 | NA | non-coding | downstream | 41470 | 48411508 ~ 48464040 (-) |
| G52881 | NA | non-coding | downstream | 147768 | 48357506 ~ 48357742 (-) |
| G52879 | NA | non-coding | downstream | 153625 | 48351570 ~ 48351885 (-) |
| G53008 | LOC106573126 | non-coding | upstream | 49728 | 48555819 ~ 48557902 (-) |
| G53524 | NA | non-coding | upstream | 606922 | 49113013 ~ 49113261 (-) |
| G53540 | NA | non-coding | upstream | 627850 | 49133941 ~ 49134182 (-) |
| G53541 | NA | non-coding | upstream | 628505 | 49134596 ~ 49135356 (-) |
| G53565 | NA | non-coding | upstream | 664081 | 49170172 ~ 49170575 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 944301 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 1126967 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 1215829 | 47288939 ~ 47289681 (-) |
| G51214 | NA | other | downstream | 1386477 | 47064774 ~ 47236625 (-) |
| G55408 | NA | other | upstream | 1905543 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 2259272 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 2271656 | 50777716 ~ 50792069 (-) |
| G56372 | NA | other | upstream | 2894636 | 51400727 ~ 51412569 (-) |
