Gene
RNA
| Item | Value |
|---|---|
| gene id | G53565 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49170172 ~ 49170575 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59788 | True | 404 | lncRNA | 0.52 | 1 | 49170172 | 49170575 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524381 | cav2 | coding | downstream | 65437 | 49098552 ~ 49104735 (-) |
| LOC110524368 | LOC106573119 | coding | downstream | 89458 | 49067489 ~ 49080714 (-) |
| LOC110532382 | LOC106573120 | coding | downstream | 125915 | 48971580 ~ 49044257 (-) |
| LOC110524359 | capza2 | coding | downstream | 212111 | 48901602 ~ 48958061 (-) |
| LOC110524343 | LOC106573121 | coding | downstream | 277685 | 48814805 ~ 48892487 (-) |
| LOC110524388 | LOC106573117 | coding | upstream | 9557 | 49180132 ~ 49208517 (-) |
| cbpa1 | cbpa1 | coding | upstream | 54137 | 49224712 ~ 49228631 (-) |
| LOC110532387 | tmtc3 | coding | upstream | 593420 | 49763995 ~ 49822972 (-) |
| LOC110524413 | LOC106573141 | coding | upstream | 677803 | 49848378 ~ 49876492 (-) |
| LOC110524441 | LOC106573156 | coding | upstream | 1089829 | 50260404 ~ 50270301 (-) |
| G53541 | NA | non-coding | downstream | 34816 | 49134596 ~ 49135356 (-) |
| G53540 | NA | non-coding | downstream | 35990 | 49133941 ~ 49134182 (-) |
| G53524 | NA | non-coding | downstream | 56911 | 49113013 ~ 49113261 (-) |
| G52974 | NA | non-coding | downstream | 568757 | 48497012 ~ 48601415 (-) |
| G53537 | NA | non-coding | upstream | 7274 | 49177849 ~ 49202748 (-) |
| G53651 | NA | non-coding | upstream | 108448 | 49279023 ~ 49279344 (-) |
| G53652 | NA | non-coding | upstream | 111085 | 49281660 ~ 49281864 (-) |
| G53655 | NA | non-coding | upstream | 112311 | 49282886 ~ 49283092 (-) |
| G53666 | NA | non-coding | upstream | 118624 | 49289199 ~ 49289470 (-) |
| LOC110524264 | LOC106573263 | other | downstream | 866036 | 48291626 ~ 48304829 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 1608963 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 1791629 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 1880491 | 47288939 ~ 47289681 (-) |
| G55408 | NA | other | upstream | 1241059 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 1594788 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 1607172 | 50777716 ~ 50792069 (-) |
| G56372 | NA | other | upstream | 2230152 | 51400727 ~ 51412569 (-) |
| G56764 | NA | other | upstream | 2576042 | 51746617 ~ 51747220 (-) |
