Gene
RNA
| Item | Value |
|---|---|
| gene id | G53655 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49282886 ~ 49283092 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59882 | True | 207 | lncRNA | 0.37 | 1 | 49282886 | 49283092 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cbpa1 | cbpa1 | coding | downstream | 54255 | 49224712 ~ 49228631 (-) |
| LOC110524388 | LOC106573117 | coding | downstream | 74369 | 49180132 ~ 49208517 (-) |
| LOC110524381 | cav2 | coding | downstream | 178151 | 49098552 ~ 49104735 (-) |
| LOC110524368 | LOC106573119 | coding | downstream | 202172 | 49067489 ~ 49080714 (-) |
| LOC110532382 | LOC106573120 | coding | downstream | 238629 | 48971580 ~ 49044257 (-) |
| LOC110532387 | tmtc3 | coding | upstream | 480903 | 49763995 ~ 49822972 (-) |
| LOC110524413 | LOC106573141 | coding | upstream | 565286 | 49848378 ~ 49876492 (-) |
| LOC110524441 | LOC106573156 | coding | upstream | 977312 | 50260404 ~ 50270301 (-) |
| LOC110524445 | LOC106573110 | coding | upstream | 1084474 | 50367566 ~ 50374531 (-) |
| LOC110524488 | LOC106573155 | coding | upstream | 1435544 | 50718636 ~ 50752172 (-) |
| G53652 | NA | non-coding | downstream | 1022 | 49281660 ~ 49281864 (-) |
| G53651 | NA | non-coding | downstream | 3542 | 49279023 ~ 49279344 (-) |
| G53537 | NA | non-coding | downstream | 80138 | 49177849 ~ 49202748 (-) |
| G53565 | NA | non-coding | downstream | 112311 | 49170172 ~ 49170575 (-) |
| G53541 | NA | non-coding | downstream | 147530 | 49134596 ~ 49135356 (-) |
| G53666 | NA | non-coding | upstream | 6107 | 49289199 ~ 49289470 (-) |
| G53677 | NA | non-coding | upstream | 16859 | 49299951 ~ 49300214 (-) |
| G53758 | NA | non-coding | upstream | 75242 | 49358334 ~ 49358555 (-) |
| G53759 | NA | non-coding | upstream | 75910 | 49359002 ~ 49359320 (-) |
| G54131 | NA | non-coding | upstream | 97013 | 49380105 ~ 49380365 (-) |
| LOC110524264 | LOC106573263 | other | downstream | 978750 | 48291626 ~ 48304829 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 1721677 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 1904343 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 1993205 | 47288939 ~ 47289681 (-) |
| G55408 | NA | other | upstream | 1128542 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 1482271 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 1494655 | 50777716 ~ 50792069 (-) |
| G56372 | NA | other | upstream | 2117635 | 51400727 ~ 51412569 (-) |
| G56764 | NA | other | upstream | 2463525 | 51746617 ~ 51747220 (-) |
