Gene
RNA
| Item | Value |
|---|---|
| gene id | G54145 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49391305 ~ 49391568 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60385 | True | 264 | lncRNA | 0.35 | 1 | 49391305 | 49391568 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cbpa1 | cbpa1 | coding | downstream | 162674 | 49224712 ~ 49228631 (-) |
| LOC110524388 | LOC106573117 | coding | downstream | 182788 | 49180132 ~ 49208517 (-) |
| LOC110524381 | cav2 | coding | downstream | 286570 | 49098552 ~ 49104735 (-) |
| LOC110524368 | LOC106573119 | coding | downstream | 310591 | 49067489 ~ 49080714 (-) |
| LOC110532382 | LOC106573120 | coding | downstream | 347048 | 48971580 ~ 49044257 (-) |
| LOC110532387 | tmtc3 | coding | upstream | 372427 | 49763995 ~ 49822972 (-) |
| LOC110524413 | LOC106573141 | coding | upstream | 456810 | 49848378 ~ 49876492 (-) |
| LOC110524441 | LOC106573156 | coding | upstream | 868836 | 50260404 ~ 50270301 (-) |
| LOC110524445 | LOC106573110 | coding | upstream | 975998 | 50367566 ~ 50374531 (-) |
| LOC110524488 | LOC106573155 | coding | upstream | 1327068 | 50718636 ~ 50752172 (-) |
| G54131 | NA | non-coding | downstream | 10940 | 49380105 ~ 49380365 (-) |
| G53759 | NA | non-coding | downstream | 31985 | 49359002 ~ 49359320 (-) |
| G53758 | NA | non-coding | downstream | 32750 | 49358334 ~ 49358555 (-) |
| G53677 | NA | non-coding | downstream | 91091 | 49299951 ~ 49300214 (-) |
| G53666 | NA | non-coding | downstream | 101835 | 49289199 ~ 49289470 (-) |
| G54159 | NA | non-coding | upstream | 18730 | 49410298 ~ 49410508 (-) |
| G54160 | NA | non-coding | upstream | 19078 | 49410646 ~ 49410963 (-) |
| G54164 | NA | non-coding | upstream | 22412 | 49413980 ~ 49414198 (-) |
| G54171 | NA | non-coding | upstream | 30753 | 49422321 ~ 49422587 (-) |
| G54367 | NA | non-coding | upstream | 309654 | 49701222 ~ 49706211 (-) |
| LOC110524264 | LOC106573263 | other | downstream | 1087169 | 48291626 ~ 48304829 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 1830096 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 2012762 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 2101624 | 47288939 ~ 47289681 (-) |
| G55408 | NA | other | upstream | 1020066 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 1373795 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 1386179 | 50777716 ~ 50792069 (-) |
| G56372 | NA | other | upstream | 2009159 | 51400727 ~ 51412569 (-) |
| G56764 | NA | other | upstream | 2355049 | 51746617 ~ 51747220 (-) |
