Gene
RNA
| Item | Value |
|---|---|
| gene id | G54367 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49701222 ~ 49706211 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger protein 135-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60613 | True | 4960 | lncRNA | 0.40 | 2 | 49701222 | 49706211 |
49,696,000
49,697,000
49,698,000
49,699,000
49,700,000
49,701,000
49,702,000
49,703,000
49,704,000
49,705,000
49,706,000
49,707,000
49,708,000
49,709,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cbpa1 | cbpa1 | coding | downstream | 472591 | 49224712 ~ 49228631 (-) |
| LOC110524388 | LOC106573117 | coding | downstream | 492705 | 49180132 ~ 49208517 (-) |
| LOC110524381 | cav2 | coding | downstream | 596487 | 49098552 ~ 49104735 (-) |
| LOC110524368 | LOC106573119 | coding | downstream | 620508 | 49067489 ~ 49080714 (-) |
| LOC110532382 | LOC106573120 | coding | downstream | 656965 | 48971580 ~ 49044257 (-) |
| LOC110532387 | tmtc3 | coding | upstream | 57784 | 49763995 ~ 49822972 (-) |
| LOC110524413 | LOC106573141 | coding | upstream | 142167 | 49848378 ~ 49876492 (-) |
| LOC110524441 | LOC106573156 | coding | upstream | 554193 | 50260404 ~ 50270301 (-) |
| LOC110524445 | LOC106573110 | coding | upstream | 661355 | 50367566 ~ 50374531 (-) |
| LOC110524488 | LOC106573155 | coding | upstream | 1012425 | 50718636 ~ 50752172 (-) |
| G54171 | NA | non-coding | downstream | 278635 | 49422321 ~ 49422587 (-) |
| G54164 | NA | non-coding | downstream | 287024 | 49413980 ~ 49414198 (-) |
| G54160 | NA | non-coding | downstream | 290259 | 49410646 ~ 49410963 (-) |
| G54159 | NA | non-coding | downstream | 290714 | 49410298 ~ 49410508 (-) |
| G54145 | NA | non-coding | downstream | 309654 | 49391305 ~ 49391568 (-) |
| G54411 | NA | non-coding | upstream | 121214 | 49827425 ~ 49840996 (-) |
| G54425 | NA | non-coding | upstream | 144833 | 49851044 ~ 49901421 (-) |
| G54513 | NA | non-coding | upstream | 242962 | 49949173 ~ 49949911 (-) |
| G54528 | NA | non-coding | upstream | 256431 | 49962642 ~ 49962841 (-) |
| G54536 | NA | non-coding | upstream | 261432 | 49967643 ~ 49968548 (-) |
| LOC110524264 | LOC106573263 | other | downstream | 1397086 | 48291626 ~ 48304829 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 2140013 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 2322679 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 2411541 | 47288939 ~ 47289681 (-) |
| G55408 | NA | other | upstream | 705423 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 1059152 | 50765363 ~ 50767431 (-) |
| LOC110524514 | borcs5 | other | upstream | 1071536 | 50777716 ~ 50792069 (-) |
| G56372 | NA | other | upstream | 1694516 | 51400727 ~ 51412569 (-) |
| G56764 | NA | other | upstream | 2040406 | 51746617 ~ 51747220 (-) |
