G54532


Basic Information

Item Value
gene id G54532
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 49966084 ~ 49966283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU60785
cctgtggaacggccattaagacactaacagcttacaaatGGTAGCCAATTAAGGttacagttatgaaaacctaggacactaaaagaggcctttctactgactctgaaaaacacttaaagaaagatgcccagggtccctgctcacccGTGTGAACGCgccttaagcatgctgcaaggagtatgaggactgcagatatagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60785 True 200 lncRNA 0.46 1 49966084 49966283

Neighbor

gene id symbol gene type direction distance location
LOC118964840 NA coding upstream 117105 49847620 ~ 49848979 (+)
LOC110524421 NA coding upstream 132081 49823910 ~ 49834003 (+)
kitlg scf coding upstream 263126 49666532 ~ 49702958 (+)
LOC110524405 LOC106573116 coding upstream 525852 49435762 ~ 49440232 (+)
LOC110524349 LOC106573123 coding upstream 1151071 48804907 ~ 48815013 (+)
LOC118964841 NA coding downstream 71240 50037523 ~ 50184257 (+)
LOC110524434 LOC106573111 coding downstream 260073 50226356 ~ 50231065 (+)
LOC110524453 LOC106573109 coding downstream 489273 50455556 ~ 50509791 (+)
LOC110524456 LOC106573106 coding downstream 564365 50530648 ~ 50592851 (+)
LOC110524482 LOC106573107 coding downstream 634352 50600635 ~ 50675495 (+)
G54507 NA non-coding upstream 19238 49946607 ~ 49946846 (+)
G54481 NA non-coding upstream 38940 49926919 ~ 49927144 (+)
G54476 NA non-coding upstream 41687 49924170 ~ 49924397 (+)
G54472 NA non-coding upstream 43454 49922371 ~ 49922630 (+)
G54041 NA non-coding upstream 169876 49793247 ~ 49796208 (+)
G54537 NA non-coding downstream 2549 49968832 ~ 49969034 (+)
G54571 NA non-coding downstream 21109 49987392 ~ 49987606 (+)
G54645 NA non-coding downstream 82811 50049094 ~ 50065311 (+)
G54651 NA non-coding downstream 93079 50059362 ~ 50091566 (+)
G53181 NA other upstream 1072172 48893497 ~ 48893912 (+)
G52324 NA other upstream 1582827 48380542 ~ 48383257 (+)
G52080 NA other upstream 1941126 48006674 ~ 48024958 (+)
LOC110520864 NA other upstream 2707186 47227246 ~ 47260224 (+)
LOC110524042 NA other upstream 3104620 46854230 ~ 46861465 (+)
LOC110524575 fgf3 other downstream 1483539 51449353 ~ 51451460 (+)
LOC118936380 LOC106581842 other downstream 3699932 53632830 ~ 53705421 (+)
G59031 NA other downstream 4021857 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 4078566 54044813 ~ 54089850 (+)

Expression


Co-expression Network