Gene
RNA
| Item | Value |
|---|---|
| gene id | G54590 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49998185 ~ 49998403 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60843 | True | 219 | lncRNA | 0.35 | 1 | 49998185 | 49998403 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524413 | LOC106573141 | coding | downstream | 121693 | 49848378 ~ 49876492 (-) |
| LOC110532387 | tmtc3 | coding | downstream | 175213 | 49763995 ~ 49822972 (-) |
| cbpa1 | cbpa1 | coding | downstream | 769554 | 49224712 ~ 49228631 (-) |
| LOC110524388 | LOC106573117 | coding | downstream | 789668 | 49180132 ~ 49208517 (-) |
| LOC110524381 | cav2 | coding | downstream | 893450 | 49098552 ~ 49104735 (-) |
| LOC110524441 | LOC106573156 | coding | upstream | 262001 | 50260404 ~ 50270301 (-) |
| LOC110524445 | LOC106573110 | coding | upstream | 369163 | 50367566 ~ 50374531 (-) |
| LOC110524488 | LOC106573155 | coding | upstream | 720233 | 50718636 ~ 50752172 (-) |
| LOC110524514 | borcs5 | coding | upstream | 779313 | 50777716 ~ 50792069 (-) |
| LOC110532393 | ckap5 | coding | upstream | 810310 | 50808713 ~ 50850668 (-) |
| G54572 | NA | non-coding | downstream | 10619 | 49987195 ~ 49987566 (-) |
| G54536 | NA | non-coding | downstream | 29637 | 49967643 ~ 49968548 (-) |
| G54528 | NA | non-coding | downstream | 35344 | 49962642 ~ 49962841 (-) |
| G54513 | NA | non-coding | downstream | 48274 | 49949173 ~ 49949911 (-) |
| G54425 | NA | non-coding | downstream | 96764 | 49851044 ~ 49901421 (-) |
| G54612 | NA | non-coding | upstream | 11127 | 50009530 ~ 50009769 (-) |
| G54615 | NA | non-coding | upstream | 14106 | 50012509 ~ 50012738 (-) |
| G55395 | NA | non-coding | upstream | 388603 | 50387006 ~ 50387249 (-) |
| G55416 | NA | non-coding | upstream | 425218 | 50423621 ~ 50423840 (-) |
| G55417 | LOC100194703 | non-coding | upstream | 426082 | 50424485 ~ 50424743 (-) |
| LOC110532382 | LOC106573120 | other | downstream | 1012268 | 48971580 ~ 49044257 (-) |
| LOC110524264 | LOC106573263 | other | downstream | 1694049 | 48291626 ~ 48304829 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 2436976 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 2619642 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 2708504 | 47288939 ~ 47289681 (-) |
| G55408 | NA | other | upstream | 413231 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 766960 | 50765363 ~ 50767431 (-) |
| G56372 | NA | other | upstream | 1402324 | 51400727 ~ 51412569 (-) |
| G56764 | NA | other | upstream | 1748214 | 51746617 ~ 51747220 (-) |
