Gene
RNA
| Item | Value |
|---|---|
| gene id | G54612 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 50009530 ~ 50009769 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60865 | True | 240 | lncRNA | 0.40 | 1 | 50009530 | 50009769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524413 | LOC106573141 | coding | downstream | 133038 | 49848378 ~ 49876492 (-) |
| LOC110532387 | tmtc3 | coding | downstream | 186558 | 49763995 ~ 49822972 (-) |
| cbpa1 | cbpa1 | coding | downstream | 780899 | 49224712 ~ 49228631 (-) |
| LOC110524388 | LOC106573117 | coding | downstream | 801013 | 49180132 ~ 49208517 (-) |
| LOC110524381 | cav2 | coding | downstream | 904795 | 49098552 ~ 49104735 (-) |
| LOC110524441 | LOC106573156 | coding | upstream | 250635 | 50260404 ~ 50270301 (-) |
| LOC110524445 | LOC106573110 | coding | upstream | 357797 | 50367566 ~ 50374531 (-) |
| LOC110524488 | LOC106573155 | coding | upstream | 708867 | 50718636 ~ 50752172 (-) |
| LOC110524514 | borcs5 | coding | upstream | 767947 | 50777716 ~ 50792069 (-) |
| LOC110532393 | ckap5 | coding | upstream | 798944 | 50808713 ~ 50850668 (-) |
| G54590 | NA | non-coding | downstream | 11127 | 49998185 ~ 49998403 (-) |
| G54572 | NA | non-coding | downstream | 21964 | 49987195 ~ 49987566 (-) |
| G54536 | NA | non-coding | downstream | 40982 | 49967643 ~ 49968548 (-) |
| G54528 | NA | non-coding | downstream | 46689 | 49962642 ~ 49962841 (-) |
| G54513 | NA | non-coding | downstream | 59619 | 49949173 ~ 49949911 (-) |
| G54615 | NA | non-coding | upstream | 2740 | 50012509 ~ 50012738 (-) |
| G55395 | NA | non-coding | upstream | 377237 | 50387006 ~ 50387249 (-) |
| G55416 | NA | non-coding | upstream | 413852 | 50423621 ~ 50423840 (-) |
| G55417 | LOC100194703 | non-coding | upstream | 414716 | 50424485 ~ 50424743 (-) |
| G55553 | NA | non-coding | upstream | 629144 | 50638913 ~ 50639142 (-) |
| LOC110532382 | LOC106573120 | other | downstream | 1023613 | 48971580 ~ 49044257 (-) |
| LOC110524264 | LOC106573263 | other | downstream | 1705394 | 48291626 ~ 48304829 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 2448321 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 2630987 | 47377641 ~ 47378543 (-) |
| G51285 | LOC106561952 | other | downstream | 2719849 | 47288939 ~ 47289681 (-) |
| G55408 | NA | other | upstream | 401865 | 50411634 ~ 50412128 (-) |
| G55627 | NA | other | upstream | 755594 | 50765363 ~ 50767431 (-) |
| G56372 | NA | other | upstream | 1390958 | 51400727 ~ 51412569 (-) |
| G56764 | NA | other | upstream | 1736848 | 51746617 ~ 51747220 (-) |
