G54645


Basic Information

Item Value
gene id G54645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 50049094 ~ 50065311 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU60900
acttttccatttgatataggggagaaaccatgtgtccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgatgattgattctaaacaacgtttgccatgttttcagtcgatattatggagttaatttggaaaaaagttcgcgttttgaggactgaattttcagattttttttggtagccaaatgtgatgtataaaacggagctatttctaatacacaaagaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggtaaattattttatttgaaggcttttatgtttttgttgaaatgttgcgtgctggatgctaatgctaacgctaaatgctacgctagctacttttacacaaatgattgttttcctatggttgagaagcatattttgaaaatctgagatgacagtgttgtttacaaaaggctaagcttgagagatggcatatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60900 True 495 lncRNA 0.34 2 50049094 50065311

Neighbor

gene id symbol gene type direction distance location
LOC118964840 NA coding upstream 200115 49847620 ~ 49848979 (+)
LOC110524421 NA coding upstream 215091 49823910 ~ 49834003 (+)
kitlg scf coding upstream 346136 49666532 ~ 49702958 (+)
LOC110524405 LOC106573116 coding upstream 608862 49435762 ~ 49440232 (+)
LOC110524349 LOC106573123 coding upstream 1234081 48804907 ~ 48815013 (+)
LOC110524434 LOC106573111 coding downstream 161045 50226356 ~ 50231065 (+)
LOC110524453 LOC106573109 coding downstream 390245 50455556 ~ 50509791 (+)
LOC110524456 LOC106573106 coding downstream 465337 50530648 ~ 50592851 (+)
LOC110524482 LOC106573107 coding downstream 535324 50600635 ~ 50675495 (+)
LOC110524496 LOC106573105 coding downstream 726885 50792196 ~ 50800380 (+)
G54571 NA non-coding upstream 61488 49987392 ~ 49987606 (+)
G54537 NA non-coding upstream 80060 49968832 ~ 49969034 (+)
G54532 NA non-coding upstream 82811 49966084 ~ 49966283 (+)
G54507 NA non-coding upstream 102248 49946607 ~ 49946846 (+)
G54481 NA non-coding upstream 121950 49926919 ~ 49927144 (+)
G54732 NA non-coding downstream 128050 50193361 ~ 50193729 (+)
G54800 NA non-coding downstream 219771 50285082 ~ 50285537 (+)
G54835 NA non-coding downstream 263247 50328558 ~ 50329351 (+)
G54841 NA non-coding downstream 271676 50336987 ~ 50337328 (+)
G54878 NA non-coding downstream 321787 50387098 ~ 50387332 (+)
G53181 NA other upstream 1155182 48893497 ~ 48893912 (+)
G52324 NA other upstream 1665837 48380542 ~ 48383257 (+)
G52080 NA other upstream 2024136 48006674 ~ 48024958 (+)
LOC110520864 NA other upstream 2790196 47227246 ~ 47260224 (+)
LOC110524042 NA other upstream 3187630 46854230 ~ 46861465 (+)
LOC110524575 fgf3 other downstream 1384511 51449353 ~ 51451460 (+)
LOC118936380 LOC106581842 other downstream 3600904 53632830 ~ 53705421 (+)
G59031 NA other downstream 3922829 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 3979538 54044813 ~ 54089850 (+)
G59963 NA other downstream 4655877 54721188 ~ 54721463 (+)

Expression


Co-expression Network