Gene
RNA
| Item | Value |
|---|---|
| gene id | G54878 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 50387098 ~ 50387332 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU61147 | True | 235 | lncRNA | 0.39 | 1 | 50387098 | 50387332 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524434 | LOC106573111 | coding | upstream | 156033 | 50226356 ~ 50231065 (+) |
| LOC118964841 | NA | coding | upstream | 303558 | 50037523 ~ 50184257 (+) |
| LOC118964840 | NA | coding | upstream | 538119 | 49847620 ~ 49848979 (+) |
| LOC110524421 | NA | coding | upstream | 553095 | 49823910 ~ 49834003 (+) |
| kitlg | scf | coding | upstream | 684140 | 49666532 ~ 49702958 (+) |
| LOC110524453 | LOC106573109 | coding | downstream | 68224 | 50455556 ~ 50509791 (+) |
| LOC110524456 | LOC106573106 | coding | downstream | 143316 | 50530648 ~ 50592851 (+) |
| LOC110524482 | LOC106573107 | coding | downstream | 213303 | 50600635 ~ 50675495 (+) |
| LOC110524496 | LOC106573105 | coding | downstream | 404864 | 50792196 ~ 50800380 (+) |
| c1h11orf49 | cssa16h11orf49 | coding | downstream | 469248 | 50856580 ~ 50871347 (+) |
| G54841 | NA | non-coding | upstream | 49770 | 50336987 ~ 50337328 (+) |
| G54835 | NA | non-coding | upstream | 57747 | 50328558 ~ 50329351 (+) |
| G54800 | NA | non-coding | upstream | 101561 | 50285082 ~ 50285537 (+) |
| G54732 | NA | non-coding | upstream | 193369 | 50193361 ~ 50193729 (+) |
| G54651 | NA | non-coding | upstream | 295532 | 50059362 ~ 50091566 (+) |
| G54879 | NA | non-coding | downstream | 542 | 50387874 ~ 50388305 (+) |
| G54889 | NA | non-coding | downstream | 11936 | 50399268 ~ 50399486 (+) |
| G54900 | NA | non-coding | downstream | 36288 | 50423620 ~ 50423916 (+) |
| G54901 | NA | non-coding | downstream | 36599 | 50423931 ~ 50424255 (+) |
| G54902 | LOC100194703 | non-coding | downstream | 37142 | 50424474 ~ 50425039 (+) |
| G53181 | NA | other | upstream | 1493186 | 48893497 ~ 48893912 (+) |
| G52324 | NA | other | upstream | 2003841 | 48380542 ~ 48383257 (+) |
| G52080 | NA | other | upstream | 2362140 | 48006674 ~ 48024958 (+) |
| LOC110520864 | NA | other | upstream | 3128200 | 47227246 ~ 47260224 (+) |
| LOC110524575 | fgf3 | other | downstream | 1062490 | 51449353 ~ 51451460 (+) |
| LOC118936380 | LOC106581842 | other | downstream | 3278883 | 53632830 ~ 53705421 (+) |
| G59031 | NA | other | downstream | 3600808 | 53988140 ~ 53988597 (+) |
| LOC110525327 | LOC106573036 | other | downstream | 3657517 | 54044813 ~ 54089850 (+) |
| G59963 | NA | other | downstream | 4333856 | 54721188 ~ 54721463 (+) |
