Gene
RNA
| Item | Value |
|---|---|
| gene id | G55553 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 50638913 ~ 50639142 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU61864 | True | 230 | lncRNA | 0.47 | 1 | 50638913 | 50639142 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524445 | LOC106573110 | coding | downstream | 264382 | 50367566 ~ 50374531 (-) |
| LOC110524441 | LOC106573156 | coding | downstream | 368612 | 50260404 ~ 50270301 (-) |
| LOC110524413 | LOC106573141 | coding | downstream | 762421 | 49848378 ~ 49876492 (-) |
| LOC110532387 | tmtc3 | coding | downstream | 815941 | 49763995 ~ 49822972 (-) |
| cbpa1 | cbpa1 | coding | downstream | 1410282 | 49224712 ~ 49228631 (-) |
| LOC110524488 | LOC106573155 | coding | upstream | 79494 | 50718636 ~ 50752172 (-) |
| LOC110524514 | borcs5 | coding | upstream | 138574 | 50777716 ~ 50792069 (-) |
| LOC110532393 | ckap5 | coding | upstream | 169571 | 50808713 ~ 50850668 (-) |
| mapk8ip1a | LOC106573101 | coding | upstream | 232333 | 50871475 ~ 50888496 (-) |
| LOC110532401 | NA | coding | upstream | 258388 | 50897530 ~ 50991398 (-) |
| G55417 | LOC100194703 | non-coding | downstream | 214170 | 50424485 ~ 50424743 (-) |
| G55416 | NA | non-coding | downstream | 215073 | 50423621 ~ 50423840 (-) |
| G55395 | NA | non-coding | downstream | 251664 | 50387006 ~ 50387249 (-) |
| G54615 | NA | non-coding | downstream | 626175 | 50012509 ~ 50012738 (-) |
| G54612 | NA | non-coding | downstream | 629144 | 50009530 ~ 50009769 (-) |
| G55611 | NA | non-coding | upstream | 91040 | 50730182 ~ 50733113 (-) |
| G55298 | NA | non-coding | upstream | 105113 | 50744255 ~ 50745454 (-) |
| G55628 | NA | non-coding | upstream | 128017 | 50767159 ~ 50814287 (-) |
| G55665 | NA | non-coding | upstream | 213064 | 50852206 ~ 50852412 (-) |
| G55753 | NA | non-coding | upstream | 251282 | 50890424 ~ 50891828 (-) |
| G55408 | NA | other | downstream | 226785 | 50411634 ~ 50412128 (-) |
| LOC110532382 | LOC106573120 | other | downstream | 1652996 | 48971580 ~ 49044257 (-) |
| LOC110524264 | LOC106573263 | other | downstream | 2334777 | 48291626 ~ 48304829 (-) |
| LOC110524104 | LOC106573248 | other | downstream | 3077704 | 47541224 ~ 47561223 (-) |
| G51649 | LOC106573246 | other | downstream | 3260370 | 47377641 ~ 47378543 (-) |
| G55627 | NA | other | upstream | 126221 | 50765363 ~ 50767431 (-) |
| G56372 | NA | other | upstream | 761585 | 51400727 ~ 51412569 (-) |
| G56764 | NA | other | upstream | 1107475 | 51746617 ~ 51747220 (-) |
| G57742 | NA | other | upstream | 1856756 | 52495898 ~ 52496234 (-) |
