G55023



Basic Information


Item Value
gene id G55023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 50640560 ~ 50640778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU61299
CTTGtgtcatcgcgcaccagcaactcctgtggtgggccgggcgcagtgcacgctaaccaaggttgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccgggttggatgtgcgctgtgttaagaagcagtgggttggttgggttgtgtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttgtagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU61299 True 219 lncRNA 0.59 1 50640560 50640778
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110524456 LOC106573106 coding upstream 47709 50530648 ~ 50592851 (+)
LOC110524453 LOC106573109 coding upstream 130769 50455556 ~ 50509791 (+)
LOC110524434 LOC106573111 coding upstream 409495 50226356 ~ 50231065 (+)
LOC118964841 NA coding upstream 557020 50037523 ~ 50184257 (+)
LOC118964840 NA coding upstream 791581 49847620 ~ 49848979 (+)
LOC110524496 LOC106573105 coding downstream 151418 50792196 ~ 50800380 (+)
c1h11orf49 cssa16h11orf49 coding downstream 215802 50856580 ~ 50871347 (+)
LOC118964313 NA coding downstream 351205 50991983 ~ 50993119 (+)
LOC110524544 LOC106573154 coding downstream 430918 51071696 ~ 51075445 (+)
LOC118964319 NA coding downstream 513729 51154507 ~ 51155396 (+)
G54907 NA non-coding upstream 210963 50429239 ~ 50429597 (+)
G54906 NA non-coding upstream 211655 50428578 ~ 50428905 (+)
G54902 LOC100194703 non-coding upstream 215521 50424474 ~ 50425039 (+)
G54901 NA non-coding upstream 216305 50423931 ~ 50424255 (+)
LOC110524482 LOC106573107 non-coding downstream 33043 50600635 ~ 50675495 (+)
G54987 NA non-coding downstream 36560 50677338 ~ 50678112 (+)
G55058 NA non-coding downstream 60819 50701597 ~ 50774393 (+)
G55070 LOC106573111 non-coding downstream 77904 50718682 ~ 50720223 (+)
G55101 NA non-coding downstream 137132 50777910 ~ 50779569 (+)
G53181 NA other upstream 1746648 48893497 ~ 48893912 (+)
G52324 NA other upstream 2257303 48380542 ~ 48383257 (+)
G52080 NA other upstream 2615602 48006674 ~ 48024958 (+)
LOC110520864 NA other upstream 3381662 47227246 ~ 47260224 (+)
LOC110524575 fgf3 other downstream 809044 51449353 ~ 51451460 (+)
LOC118936380 LOC106581842 other downstream 3025437 53632830 ~ 53705421 (+)
G59031 NA other downstream 3347362 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 3404071 54044813 ~ 54089850 (+)
G59963 NA other downstream 4080410 54721188 ~ 54721463 (+)

Expression


G55023 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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G55023 Expression in each Bioproject

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G55023 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network