G55664


Basic Information

Item Value
gene id G55664
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 50852281 ~ 50852604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU61989
gtcttgaaggagttcccagatatgctgagcacttgtttgctgcttttccttcactttgcagtccaactcattcaaaaccatctcaattgggttgaggttgggtgattgtagaggccaggtcatctgatgcagcactccatcactctccttcttggtcaaatagcccttactttggtcattgtcctgttgaaaaacaaatgattgtcccactaagcgcaaaccagatggtcgctgcagaattctgtggtagccatgctggttaagtgtgccttggattctaaataaatcactgacagtgtggGAACCGaacatgcagagattatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU61989 True 324 lncRNA 0.45 1 50852281 50852604

Neighbor

gene id symbol gene type direction distance location
LOC110524496 LOC106573105 coding upstream 51901 50792196 ~ 50800380 (+)
LOC110524482 LOC106573107 coding upstream 178106 50600635 ~ 50675495 (+)
LOC110524456 LOC106573106 coding upstream 259430 50530648 ~ 50592851 (+)
LOC110524453 LOC106573109 coding upstream 342490 50455556 ~ 50509791 (+)
LOC110524434 LOC106573111 coding upstream 621216 50226356 ~ 50231065 (+)
c1h11orf49 cssa16h11orf49 coding downstream 3976 50856580 ~ 50871347 (+)
LOC118964313 NA coding downstream 139379 50991983 ~ 50993119 (+)
LOC110524544 LOC106573154 coding downstream 219092 51071696 ~ 51075445 (+)
LOC118964319 NA coding downstream 301903 51154507 ~ 51155396 (+)
acte1 LOC106561611 coding downstream 311473 51164077 ~ 51170344 (+)
G55115 ckap5 non-coding upstream 34833 50810146 ~ 50817448 (+)
G55101 NA non-coding upstream 72712 50777910 ~ 50779569 (+)
G55058 NA non-coding upstream 77888 50701597 ~ 50774393 (+)
G55070 LOC106573111 non-coding upstream 132058 50718682 ~ 50720223 (+)
G54987 NA non-coding upstream 174169 50677338 ~ 50678112 (+)
G55690 NA non-coding downstream 38160 50890764 ~ 50891884 (+)
G55731 NA non-coding downstream 99129 50951733 ~ 50951962 (+)
G55908 LOC106561613 non-coding downstream 240128 51092732 ~ 51094575 (+)
G55963 NA non-coding downstream 323030 51175634 ~ 51194020 (+)
G56152 NA non-coding downstream 386726 51239330 ~ 51239638 (+)
LOC118964841 NA other upstream 768285 50037523 ~ 50184257 (+)
G53181 NA other upstream 1958369 48893497 ~ 48893912 (+)
G52324 NA other upstream 2469024 48380542 ~ 48383257 (+)
G52080 NA other upstream 2827323 48006674 ~ 48024958 (+)
LOC110520864 NA other upstream 3593383 47227246 ~ 47260224 (+)
LOC110524575 fgf3 other downstream 597218 51449353 ~ 51451460 (+)
LOC118936380 LOC106581842 other downstream 2813611 53632830 ~ 53705421 (+)
G59031 NA other downstream 3135536 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 3192245 54044813 ~ 54089850 (+)
G59963 NA other downstream 3868584 54721188 ~ 54721463 (+)

Expression


Co-expression Network