Gene
RNA
| Item | Value |
|---|---|
| gene id | G55690 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 50890764 ~ 50891884 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62017 | True | 728 | lncRNA | 0.37 | 2 | 50890764 | 50891884 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c1h11orf49 | cssa16h11orf49 | coding | upstream | 19417 | 50856580 ~ 50871347 (+) |
| LOC110524496 | LOC106573105 | coding | upstream | 90384 | 50792196 ~ 50800380 (+) |
| LOC110524482 | LOC106573107 | coding | upstream | 216589 | 50600635 ~ 50675495 (+) |
| LOC110524456 | LOC106573106 | coding | upstream | 297913 | 50530648 ~ 50592851 (+) |
| LOC110524453 | LOC106573109 | coding | upstream | 380973 | 50455556 ~ 50509791 (+) |
| LOC118964313 | NA | coding | downstream | 100099 | 50991983 ~ 50993119 (+) |
| LOC110524544 | LOC106573154 | coding | downstream | 179812 | 51071696 ~ 51075445 (+) |
| LOC118964319 | NA | coding | downstream | 262623 | 51154507 ~ 51155396 (+) |
| acte1 | LOC106561611 | coding | downstream | 272193 | 51164077 ~ 51170344 (+) |
| shank2b | LOC106573098 | coding | downstream | 322946 | 51214830 ~ 51342260 (+) |
| G55664 | NA | non-coding | upstream | 38160 | 50852281 ~ 50852604 (+) |
| G55115 | ckap5 | non-coding | upstream | 73316 | 50810146 ~ 50817448 (+) |
| G55101 | NA | non-coding | upstream | 111195 | 50777910 ~ 50779569 (+) |
| G55058 | NA | non-coding | upstream | 116371 | 50701597 ~ 50774393 (+) |
| G55070 | LOC106573111 | non-coding | upstream | 170541 | 50718682 ~ 50720223 (+) |
| G55731 | NA | non-coding | downstream | 59849 | 50951733 ~ 50951962 (+) |
| G55908 | LOC106561613 | non-coding | downstream | 200848 | 51092732 ~ 51094575 (+) |
| G55963 | NA | non-coding | downstream | 283750 | 51175634 ~ 51194020 (+) |
| G56152 | NA | non-coding | downstream | 347446 | 51239330 ~ 51239638 (+) |
| G56156 | NA | non-coding | downstream | 354074 | 51245958 ~ 51246251 (+) |
| LOC118964841 | NA | other | upstream | 806768 | 50037523 ~ 50184257 (+) |
| G53181 | NA | other | upstream | 1996852 | 48893497 ~ 48893912 (+) |
| G52324 | NA | other | upstream | 2507507 | 48380542 ~ 48383257 (+) |
| G52080 | NA | other | upstream | 2865806 | 48006674 ~ 48024958 (+) |
| LOC110520864 | NA | other | upstream | 3631866 | 47227246 ~ 47260224 (+) |
| LOC110524575 | fgf3 | other | downstream | 557938 | 51449353 ~ 51451460 (+) |
| LOC118936380 | LOC106581842 | other | downstream | 2774331 | 53632830 ~ 53705421 (+) |
| G59031 | NA | other | downstream | 3096256 | 53988140 ~ 53988597 (+) |
| LOC110525327 | LOC106573036 | other | downstream | 3152965 | 54044813 ~ 54089850 (+) |
| G59963 | NA | other | downstream | 3829304 | 54721188 ~ 54721463 (+) |
