Gene
RNA
| Item | Value |
|---|---|
| gene id | G55840 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 50993685 ~ 50993951 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62170 | True | 267 | lncRNA | 0.39 | 1 | 50993685 | 50993951 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532401 | NA | coding | downstream | 2287 | 50897530 ~ 50991398 (-) |
| mapk8ip1a | LOC106573101 | coding | downstream | 105189 | 50871475 ~ 50888496 (-) |
| LOC110532393 | ckap5 | coding | downstream | 143017 | 50808713 ~ 50850668 (-) |
| LOC110524514 | borcs5 | coding | downstream | 208646 | 50777716 ~ 50792069 (-) |
| LOC110524488 | LOC106573155 | coding | downstream | 241513 | 50718636 ~ 50752172 (-) |
| zgc:101566 | LOC106573100 | coding | upstream | 98574 | 51041431 ~ 51144745 (-) |
| LOC110524590 | ccnd1 | coding | upstream | 485095 | 51479046 ~ 51491719 (-) |
| LOC110524599 | NA | coding | upstream | 679602 | 51601527 ~ 51674973 (-) |
| LOC110524618 | LOC106573092 | coding | upstream | 857031 | 51850982 ~ 51886676 (-) |
| LOC110524646 | LOC106573087 | coding | upstream | 998486 | 51992437 ~ 52100196 (-) |
| G55755 | NA | non-coding | downstream | 96854 | 50893317 ~ 50896831 (-) |
| G55753 | NA | non-coding | downstream | 101857 | 50890424 ~ 50891828 (-) |
| G55665 | NA | non-coding | downstream | 141273 | 50852206 ~ 50852412 (-) |
| G55628 | NA | non-coding | downstream | 179398 | 50767159 ~ 50814287 (-) |
| G55298 | NA | non-coding | downstream | 248231 | 50744255 ~ 50745454 (-) |
| G56122 | NA | non-coding | upstream | 212608 | 51206559 ~ 51206794 (-) |
| G56148 | NA | non-coding | upstream | 237772 | 51231723 ~ 51233441 (-) |
| G56270 | NA | non-coding | upstream | 258934 | 51252885 ~ 51253108 (-) |
| G56271 | NA | non-coding | upstream | 259617 | 51253568 ~ 51253864 (-) |
| G55627 | NA | other | downstream | 226254 | 50765363 ~ 50767431 (-) |
| G55408 | NA | other | downstream | 581557 | 50411634 ~ 50412128 (-) |
| LOC110532382 | LOC106573120 | other | downstream | 2007768 | 48971580 ~ 49044257 (-) |
| LOC110524264 | LOC106573263 | other | downstream | 2689549 | 48291626 ~ 48304829 (-) |
| G56372 | NA | other | upstream | 406776 | 51400727 ~ 51412569 (-) |
| G56764 | NA | other | upstream | 752666 | 51746617 ~ 51747220 (-) |
| G57742 | NA | other | upstream | 1501947 | 52495898 ~ 52496234 (-) |
| G58565 | LOC106561659 | other | upstream | 2145507 | 53139458 ~ 53140304 (-) |
| LOC110525078 | LOC105021811 | other | upstream | 2340773 | 53334724 ~ 53338484 (-) |
