G56185


Basic Information

Item Value
gene id G56185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 51289109 ~ 51289512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU62530
gggttTAAAGCCTGTCGGGTGTTGTGGGTGAATCTCCTGGGGATGTGGAGGTGAAGGTTTATCGCCTGTCTTCAGGGAGAGGGGGTTCTGCTCTACAGATGGGTGTGTCTGGGACCTCAGAGTGATCTGTCTCGTAGGCCCTTCACTCTATCAGTGATCTGTCTCTTAATCCCTTCACTCTATCAGTGATCTGTCTCTTATTCCCTTCACTCTATCAGTGATCTGTCTCTTATTCCCTTCACTCTATCAGTGATCTGTCTCTTATCCCCTTCACACTATCAGTGATCTGTCTCTTATTCCCTTCACTCTATCAGTGATCTGTCTCTTATTCCCTTCACTCTATCAGTGACCTGTCTCTTCTTCCCTTCACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62530 True 372 lncRNA 0.47 2 51289109 51289512

Neighbor

gene id symbol gene type direction distance location
acte1 LOC106561611 coding upstream 118765 51164077 ~ 51170344 (+)
LOC118964319 NA coding upstream 133713 51154507 ~ 51155396 (+)
LOC110524544 LOC106573154 coding upstream 213664 51071696 ~ 51075445 (+)
LOC118964313 NA coding upstream 295990 50991983 ~ 50993119 (+)
c1h11orf49 cssa16h11orf49 coding upstream 417762 50856580 ~ 50871347 (+)
LOC110524569 LOC106573096 coding downstream 68776 51358288 ~ 51424303 (+)
LOC110524575 fgf3 coding downstream 159841 51449353 ~ 51451460 (+)
LOC110524584 LOC106573153 coding downstream 165619 51455131 ~ 51458797 (+)
trnap-ugg-2 NA coding downstream 340656 51630168 ~ 51630239 (+)
trnap-agg NA coding downstream 341320 51630832 ~ 51630903 (+)
G56162 NA non-coding upstream 33465 51255351 ~ 51255644 (+)
G56156 NA non-coding upstream 42858 51245958 ~ 51246251 (+)
G56152 NA non-coding upstream 49471 51239330 ~ 51239638 (+)
G55963 NA non-coding upstream 95089 51175634 ~ 51194020 (+)
G55908 LOC106561613 non-coding upstream 194534 51092732 ~ 51094575 (+)
shank2b LOC106573098 non-coding downstream 43921 51214830 ~ 51342260 (+)
G56415 NA non-coding downstream 153452 51442964 ~ 51443171 (+)
G56455 NA non-coding downstream 184184 51473696 ~ 51473921 (+)
G56475 NA non-coding downstream 210693 51500205 ~ 51500443 (+)
G56487 NA non-coding downstream 229223 51518735 ~ 51555869 (+)
LOC118964841 NA other upstream 1205113 50037523 ~ 50184257 (+)
G53181 NA other upstream 2395197 48893497 ~ 48893912 (+)
G52324 NA other upstream 2905852 48380542 ~ 48383257 (+)
G52080 NA other upstream 3264151 48006674 ~ 48024958 (+)
LOC110520864 NA other upstream 4030211 47227246 ~ 47260224 (+)
LOC118936380 LOC106581842 other downstream 2376703 53632830 ~ 53705421 (+)
G59031 NA other downstream 2698628 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 2755337 54044813 ~ 54089850 (+)
G59963 NA other downstream 3431676 54721188 ~ 54721463 (+)

Expression


Co-expression Network