Gene
RNA
| Item | Value |
|---|---|
| gene id | G56455 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 51473696 ~ 51473921 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62808 | True | 226 | lncRNA | 0.35 | 1 | 51473696 | 51473921 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524584 | LOC106573153 | coding | upstream | 14899 | 51455131 ~ 51458797 (+) |
| LOC110524575 | fgf3 | coding | upstream | 22236 | 51449353 ~ 51451460 (+) |
| LOC110524569 | LOC106573096 | coding | upstream | 49393 | 51358288 ~ 51424303 (+) |
| shank2b | LOC106573098 | coding | upstream | 132063 | 51214830 ~ 51342260 (+) |
| acte1 | LOC106561611 | coding | upstream | 303352 | 51164077 ~ 51170344 (+) |
| trnap-ugg-2 | NA | coding | downstream | 156247 | 51630168 ~ 51630239 (+) |
| trnap-agg | NA | coding | downstream | 156911 | 51630832 ~ 51630903 (+) |
| LOC110524604 | LOC106573091 | coding | downstream | 328076 | 51801997 ~ 51852291 (+) |
| LOC110524623 | LOC106573089 | coding | downstream | 414479 | 51888400 ~ 51894917 (+) |
| LOC110524629 | LOC106573088 | coding | downstream | 426402 | 51900323 ~ 51917984 (+) |
| G56415 | NA | non-coding | upstream | 30525 | 51442964 ~ 51443171 (+) |
| G56185 | NA | non-coding | upstream | 184184 | 51289109 ~ 51289512 (+) |
| G56162 | NA | non-coding | upstream | 218052 | 51255351 ~ 51255644 (+) |
| G56156 | NA | non-coding | upstream | 227445 | 51245958 ~ 51246251 (+) |
| G56475 | NA | non-coding | downstream | 26284 | 51500205 ~ 51500443 (+) |
| G56487 | NA | non-coding | downstream | 44814 | 51518735 ~ 51555869 (+) |
| G56507 | NA | non-coding | downstream | 75448 | 51549369 ~ 51565773 (+) |
| G56554 | NA | non-coding | downstream | 133693 | 51607614 ~ 51607991 (+) |
| G56541 | NA | non-coding | downstream | 199654 | 51673575 ~ 51674734 (+) |
| LOC118964841 | NA | other | upstream | 1389700 | 50037523 ~ 50184257 (+) |
| G53181 | NA | other | upstream | 2579784 | 48893497 ~ 48893912 (+) |
| G52324 | NA | other | upstream | 3090439 | 48380542 ~ 48383257 (+) |
| G52080 | NA | other | upstream | 3448738 | 48006674 ~ 48024958 (+) |
| LOC118936380 | LOC106581842 | other | downstream | 2192294 | 53632830 ~ 53705421 (+) |
| G59031 | NA | other | downstream | 2514219 | 53988140 ~ 53988597 (+) |
| LOC110525327 | LOC106573036 | other | downstream | 2570928 | 54044813 ~ 54089850 (+) |
| G59963 | NA | other | downstream | 3247267 | 54721188 ~ 54721463 (+) |
| G61202 | LOC106573044 | other | downstream | 4431587 | 55905508 ~ 55923376 (+) |
