G56835


Basic Information

Item Value
gene id G56835
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 51764781 ~ 51764994 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU63201
catcacgcacctgcgactcctgtggcgggccgggcgcagtgcgtgtgctaaccaggtcgccaggtgctcagtgtttccgccgacacattggtgcgactggcttccgggttggatgcgcgctgtgttaagaagcagtgcggcttggttgggttgtgtttcagaggacgcatggctttcgaccttcgtctctcccgagcccgtacgggtgttgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63201 True 214 lncRNA 0.29 1 51764781 51764994

Neighbor

gene id symbol gene type direction distance location
trnap-agg NA coding upstream 133878 51630832 ~ 51630903 (+)
trnap-ugg-2 NA coding upstream 134542 51630168 ~ 51630239 (+)
LOC110524584 LOC106573153 coding upstream 305984 51455131 ~ 51458797 (+)
LOC110524575 fgf3 coding upstream 313321 51449353 ~ 51451460 (+)
LOC110524569 LOC106573096 coding upstream 340478 51358288 ~ 51424303 (+)
LOC110524604 LOC106573091 coding downstream 37003 51801997 ~ 51852291 (+)
LOC110524623 LOC106573089 coding downstream 123406 51888400 ~ 51894917 (+)
LOC110524629 LOC106573088 coding downstream 135329 51900323 ~ 51917984 (+)
LOC110524688 LOC106573082 coding downstream 755512 52520506 ~ 52524718 (+)
LOC110524698 LOC106573080 coding downstream 763784 52528778 ~ 52551209 (+)
G56541 NA non-coding upstream 90047 51673575 ~ 51674734 (+)
G56554 NA non-coding upstream 156790 51607614 ~ 51607991 (+)
G56507 NA non-coding upstream 199008 51549369 ~ 51565773 (+)
G56487 NA non-coding upstream 208912 51518735 ~ 51555869 (+)
G56475 NA non-coding upstream 264338 51500205 ~ 51500443 (+)
G56860 NA non-coding downstream 21462 51786456 ~ 51786792 (+)
G56861 NA non-coding downstream 21842 51786836 ~ 51787037 (+)
G56916 NA non-coding downstream 80936 51845930 ~ 51846185 (+)
G56917 NA non-coding downstream 81493 51846487 ~ 51846790 (+)
G56918 NA non-coding downstream 81894 51846888 ~ 51847117 (+)
LOC118964841 NA other upstream 1680785 50037523 ~ 50184257 (+)
G53181 NA other upstream 2870869 48893497 ~ 48893912 (+)
G52324 NA other upstream 3381524 48380542 ~ 48383257 (+)
G52080 NA other upstream 3739823 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 1901221 53632830 ~ 53705421 (+)
G59031 NA other downstream 2223146 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 2279855 54044813 ~ 54089850 (+)
G59963 NA other downstream 2956194 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 4140514 55905508 ~ 55923376 (+)

Expression


Co-expression Network