G56916


Basic Information

Item Value
gene id G56916
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 51845930 ~ 51846185 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU63288
tctcaattgggttgaggtagggtgattgtggagaccaggtcatctgatgcagcactccagcactctccttcttggtcaaatagtccttacacatcctggaggtgtgttgggtcattgtcctgttgaaaaacaaatgatagtcccactaagcacaaaccagatgggatggtgtatcgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaataaatcacacagtgtcaccagcaaagcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63288 True 256 lncRNA 0.46 1 51845930 51846185

Neighbor

gene id symbol gene type direction distance location
trnap-agg NA coding upstream 215027 51630832 ~ 51630903 (+)
trnap-ugg-2 NA coding upstream 215691 51630168 ~ 51630239 (+)
LOC110524584 LOC106573153 coding upstream 387133 51455131 ~ 51458797 (+)
LOC110524575 fgf3 coding upstream 394470 51449353 ~ 51451460 (+)
LOC110524569 LOC106573096 coding upstream 421627 51358288 ~ 51424303 (+)
LOC110524623 LOC106573089 coding downstream 42215 51888400 ~ 51894917 (+)
LOC110524629 LOC106573088 coding downstream 54138 51900323 ~ 51917984 (+)
LOC110524688 LOC106573082 coding downstream 674321 52520506 ~ 52524718 (+)
LOC110524698 LOC106573080 coding downstream 682593 52528778 ~ 52551209 (+)
LOC110524804 NA coding downstream 852495 52698680 ~ 52702647 (+)
G56861 NA non-coding upstream 58893 51786836 ~ 51787037 (+)
G56860 NA non-coding upstream 59138 51786456 ~ 51786792 (+)
G56835 NA non-coding upstream 80936 51764781 ~ 51764994 (+)
G56541 NA non-coding upstream 171196 51673575 ~ 51674734 (+)
G56554 NA non-coding upstream 237939 51607614 ~ 51607991 (+)
G56917 NA non-coding downstream 302 51846487 ~ 51846790 (+)
G56918 NA non-coding downstream 703 51846888 ~ 51847117 (+)
LOC110524604 LOC106573091 non-coding downstream 3901 51801997 ~ 51852291 (+)
G56876 NA non-coding downstream 21516 51867701 ~ 51919894 (+)
G56985 NA non-coding downstream 144924 51991109 ~ 51993312 (+)
LOC118964841 NA other upstream 1761934 50037523 ~ 50184257 (+)
G53181 NA other upstream 2952018 48893497 ~ 48893912 (+)
G52324 NA other upstream 3462673 48380542 ~ 48383257 (+)
G52080 NA other upstream 3820972 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 1820030 53632830 ~ 53705421 (+)
G59031 NA other downstream 2141955 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 2198664 54044813 ~ 54089850 (+)
G59963 NA other downstream 2875003 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 4059323 55905508 ~ 55923376 (+)

Expression


Co-expression Network