G56918


Basic Information

Item Value
gene id G56918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 51846888 ~ 51847117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU63290
ggttcagagaatgccaagagtgtggaaagctgccatcaagacaaagggtggctactttgaagaatctcaaatataaactatattttgatttgtttaacacctttttggttactacatgagtccacatgtgttgtcttcactattattctacaaatagtcaaaattaagaaaaacccttgaatgagtaggtgtgtccaaactattggctggtactgtataccGATTAATTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63290 True 230 lncRNA 0.43 1 51846888 51847117

Neighbor

gene id symbol gene type direction distance location
trnap-agg NA coding upstream 215985 51630832 ~ 51630903 (+)
trnap-ugg-2 NA coding upstream 216649 51630168 ~ 51630239 (+)
LOC110524584 LOC106573153 coding upstream 388091 51455131 ~ 51458797 (+)
LOC110524575 fgf3 coding upstream 395428 51449353 ~ 51451460 (+)
LOC110524569 LOC106573096 coding upstream 422585 51358288 ~ 51424303 (+)
LOC110524623 LOC106573089 coding downstream 41283 51888400 ~ 51894917 (+)
LOC110524629 LOC106573088 coding downstream 53206 51900323 ~ 51917984 (+)
LOC110524688 LOC106573082 coding downstream 673389 52520506 ~ 52524718 (+)
LOC110524698 LOC106573080 coding downstream 681661 52528778 ~ 52551209 (+)
LOC110524804 NA coding downstream 851563 52698680 ~ 52702647 (+)
G56917 NA non-coding upstream 98 51846487 ~ 51846790 (+)
G56916 NA non-coding upstream 703 51845930 ~ 51846185 (+)
G56861 NA non-coding upstream 59851 51786836 ~ 51787037 (+)
G56860 NA non-coding upstream 60096 51786456 ~ 51786792 (+)
G56835 NA non-coding upstream 81894 51764781 ~ 51764994 (+)
LOC110524604 LOC106573091 non-coding downstream 2969 51801997 ~ 51852291 (+)
G56876 NA non-coding downstream 20584 51867701 ~ 51919894 (+)
G56985 NA non-coding downstream 143992 51991109 ~ 51993312 (+)
G57262 NA non-coding downstream 265758 52112875 ~ 52113109 (+)
G57312 NA non-coding downstream 314435 52161552 ~ 52161839 (+)
LOC118964841 NA other upstream 1762892 50037523 ~ 50184257 (+)
G53181 NA other upstream 2952976 48893497 ~ 48893912 (+)
G52324 NA other upstream 3463631 48380542 ~ 48383257 (+)
G52080 NA other upstream 3821930 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 1819098 53632830 ~ 53705421 (+)
G59031 NA other downstream 2141023 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 2197732 54044813 ~ 54089850 (+)
G59963 NA other downstream 2874071 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 4058391 55905508 ~ 55923376 (+)

Expression


Co-expression Network