G57262


Basic Information

Item Value
gene id G57262
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52112875 ~ 52113109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU63653
gtatttcgaagtgttttgtgaaagtttatcgtcgacttttttaattttaaaaaatgacgcagcgttttgaaacaatgttttttctgaattacacagtttccatagatggctattttgggtatatatggaccgatttaatcgaaaaaaatacccaatagtgatgtttatggggcatataggagtgccaagaaagaagctcgtcaaaggtaatgaatgttttatattttatttctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63653 True 235 lncRNA 0.38 1 52112875 52113109

Neighbor

gene id symbol gene type direction distance location
LOC110524629 LOC106573088 coding upstream 194891 51900323 ~ 51917984 (+)
LOC110524623 LOC106573089 coding upstream 217958 51888400 ~ 51894917 (+)
LOC110524604 LOC106573091 coding upstream 261100 51801997 ~ 51852291 (+)
trnap-agg NA coding upstream 481972 51630832 ~ 51630903 (+)
trnap-ugg-2 NA coding upstream 482636 51630168 ~ 51630239 (+)
LOC110524688 LOC106573082 coding downstream 407397 52520506 ~ 52524718 (+)
LOC110524698 LOC106573080 coding downstream 415669 52528778 ~ 52551209 (+)
LOC110524804 NA coding downstream 585571 52698680 ~ 52702647 (+)
LOC110524813 LOC106573076 coding downstream 594441 52707550 ~ 52722838 (+)
LOC110524844 LOC106573071 coding downstream 769761 52882870 ~ 52889860 (+)
G56985 NA non-coding upstream 119563 51991109 ~ 51993312 (+)
G56876 NA non-coding upstream 192981 51867701 ~ 51919894 (+)
G56918 NA non-coding upstream 265758 51846888 ~ 51847117 (+)
G56917 NA non-coding upstream 266085 51846487 ~ 51846790 (+)
G57312 NA non-coding downstream 48443 52161552 ~ 52161839 (+)
G57337 NA non-coding downstream 89595 52202704 ~ 52208886 (+)
G57364 NA non-coding downstream 128705 52241814 ~ 52259706 (+)
G57416 LOC106573083 non-coding downstream 220822 52333931 ~ 52339600 (+)
G57675 NA non-coding downstream 338307 52451416 ~ 52451669 (+)
LOC110524575 fgf3 other upstream 661940 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 2028879 50037523 ~ 50184257 (+)
G53181 NA other upstream 3218963 48893497 ~ 48893912 (+)
G52324 NA other upstream 3729618 48380542 ~ 48383257 (+)
G52080 NA other upstream 4087917 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 1553106 53632830 ~ 53705421 (+)
G59031 NA other downstream 1875031 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 1931740 54044813 ~ 54089850 (+)
G59963 NA other downstream 2608079 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 3792399 55905508 ~ 55923376 (+)

Expression


Co-expression Network