G57715



Basic Information


Item Value
gene id G57715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52479076 ~ 52479302 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU64141
cagtatgatggccttgagatataaactgtttttcagtctctcggtccctgctttgatgcacctgtgctgacttcgccttctggatgatagcggggtgaacaggcaatggctcgggtggttgttgtccttgatgatctttttggccttcctgtgacatcgggtgatgtgggtgtcctggagggcaggtagtttgccaccggtgacgcgttgtgcagacctcactaccc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU64141 True 227 lncRNA 0.42 1 52479076 52479302

Neighbor


gene id symbol gene type direction distance location
LOC110532407 NA coding downstream 16954 52459257 ~ 52462122 (-)
LOC110524680 LOC106573083 coding downstream 30776 52333895 ~ 52448300 (-)
LOC110524655 LOC106573085 coding downstream 157481 52206796 ~ 52321595 (-)
LOC118966705 LOC106573087 coding downstream 281871 52192622 ~ 52197205 (-)
LOC110524646 LOC106573087 coding downstream 378880 51992437 ~ 52100196 (-)
LOC118964321 NA coding upstream 20037 52499339 ~ 52503763 (-)
LOC110524730 LOC106573078 coding upstream 85720 52565022 ~ 52621034 (-)
LOC110524766 pmge coding upstream 145055 52624357 ~ 52636698 (-)
LOC110524780 LOC106573150 coding upstream 165647 52644949 ~ 52654488 (-)
LOC118964326 NA coding upstream 202587 52681889 ~ 52682613 (-)
G57698 NA non-coding downstream 11170 52467665 ~ 52467906 (-)
G57696 NA non-coding downstream 12408 52466309 ~ 52466668 (-)
G57674 NA non-coding downstream 29018 52449837 ~ 52450058 (-)
G57589 LOC106573086 non-coding downstream 165781 52312406 ~ 52313295 (-)
G57301 NA non-coding downstream 335985 52142852 ~ 52143091 (-)
G57717 NA non-coding upstream 264 52479566 ~ 52479783 (-)
G57730 NA non-coding upstream 4650 52483952 ~ 52484227 (-)
G57741 NA non-coding upstream 15871 52495173 ~ 52495466 (-)
G57917 LOC106573080 non-coding upstream 59044 52538346 ~ 52540057 (-)
G57949 NA non-coding upstream 66763 52546065 ~ 52551208 (-)
G56764 NA other downstream 731856 51746617 ~ 51747220 (-)
G56372 NA other downstream 1074733 51400727 ~ 51412569 (-)
LOC110524514 borcs5 other downstream 1687007 50777716 ~ 50792069 (-)
G55627 NA other downstream 1711645 50765363 ~ 50767431 (-)
G55408 NA other downstream 2066948 50411634 ~ 50412128 (-)
G57742 NA other upstream 16596 52495898 ~ 52496234 (-)
G58565 LOC106561659 other upstream 660156 53139458 ~ 53140304 (-)
LOC110525078 LOC105021811 other upstream 855422 53334724 ~ 53338484 (-)
G58718 LOC100194703 other upstream 946662 53425964 ~ 53426316 (-)
G58842 NA other upstream 1109120 53588422 ~ 53588770 (-)

Expression



Co-expression Network