G58010


Basic Information

Item Value
gene id G58010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52721072 ~ 52722815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU64494
TTTGTTTTTCCAGACGGGCAGTGGACAGTTCAATTCCTTTAAGCTCCTCATTGTGTTTTATATCTCCGCATCACGTTAAAAACCACAGTAAGTATGACTGATTGTTGGTTTCACCTGGATCAGTTCATGTTTCTAGTGAATAATGTTTTAATAGGGGATAtagcaggagagagaaagagagagataaagatgtAGATATTATGGAGTTAAGACTTAAAAATAAAAGGTTGTGAAGGGAGGTTATTCATTCGCAAGGCCCAGTCAGAGGCAGAGCGCTCCTTGGATTAAATTGCTAGCCGTCATTTGTCATCGTCTTCTAGCACCTTCCTTTCACACAATCTCCGATATCGCATGACATTATTTAAATTCTCACTCTTTTCTACAGGTGCATATCAGGACATCGTGACATCTAGGAAGCCTTTTCATCAACCCTGTCATCATTTATCTGTTGGGTCTTCTTGTGACTTTCCTGATAAGGGTTTAGCTACTGTAGTTGCCACACAGTGGCACTGTGCGTATCAGACCAAACCCTACACCTTAGGATGTCCCATCTTCCCTCCAACAGTCTTTAAAGTAAAATTCCACCCCAAAACATTCAGTCCACTGCTGTTATAATCCCAAACTTTCAAaaaaactgaagaaaaaaaaaacagctggtatgatgcattttgcttcatatgatgcaaaacgcaGCATGTTATGAAAAAAAGAGCTTAACAGCAGTAAATCTGAATTTTGAATGTTAAACATCTTAACTTGATTGCTGCCATGCAAAAAAATTGGGACTTCAACAATCAACTACTTTAAATATTGTTCTTCAATTTATGCCTCCACTACAGCCATTCTTAGTTTCCCCAGAACTAGCATGTAACGTGCTGAGGTCTGGTATCCTGACACTAGGCCTATTCTTCTTCCAATCTGAGAATAGTCGTGAGACTAATTATTATTCTTCGAACCCCGGCGGTCAGTCCCCCAGTTAGGCAGTGCTCCATCCTCTGATACAGAGGTCGAACTGAATCTTGCCTCTACTACAGGATGGGGCACCATGACCCCAAAGGGAAtgtgggttttaatgacctgtACAAGACAGGCCATTGGGGCGCATTCCAGGCAGACTACATTGCAGTTGCCTGCCAGATCTCACAATGCCTGTATCAGCTAACTAGTTAATCAGGTATAGCTAATCAGTTATATCAGTTAACCGCATATGATATAGCAGACTGACACCAGTCAGCAAAGTCGATGACCATTGGTTGCTGCGTGAGTGCAGCGTGACTGCAATATTGTCAGCCTGGAACGTGACCATTGTGACCCTGCCTAACAGGGAAGCAGATTGGCTTGGCTGTGCCCTCAACTCCCACATCCTAACATTATATCCATCTGTTACCATCTCTGTCTGCATCATTTTCTGTCATCTGAACCAATTAAAACAAGCCTGAAGTAATTTTTACCCCTGTTTTTCTCGAAAGATTTTCAATCCTACCTCCTCTTAATCAGTTAAAAGGCATTTGGTATCATTTTTGCCTTAAAGTTATAGTTCGCCTTAAAGCTTCTCTGCACTGAGTGAGTGTTAACCGTTTCATTCAGTCTCCTGTTTTATTCAAAGTGGGGAGGATGAGGGCCCTTGGGGCAAAGTTTTAAGAGCAGATTCACTATTCAGTTTGTTGCTTCATTCTCAAAGAGTAATCATGACTTCACTTTTTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64494 True 1707 lncRNA 0.39 2 52721072 52722815

Neighbor

gene id symbol gene type direction distance location
LOC118964326 NA coding downstream 38459 52681889 ~ 52682613 (-)
LOC110524780 LOC106573150 coding downstream 66584 52644949 ~ 52654488 (-)
LOC110524766 pmge coding downstream 84374 52624357 ~ 52636698 (-)
LOC110524730 LOC106573078 coding downstream 100038 52565022 ~ 52621034 (-)
LOC118964321 NA coding downstream 217309 52499339 ~ 52503763 (-)
LOC110524838 LOC106573075 coding upstream 21502 52744317 ~ 52753305 (-)
LOC110524843 LOC106573072 coding upstream 43667 52766482 ~ 52769164 (-)
LOC110532414 LOC106573136 coding upstream 88034 52810849 ~ 52815285 (-)
LOC110521107 LOC106573149 coding upstream 93346 52816161 ~ 52818942 (-)
LOC110524896 LOC106573068 coding upstream 221045 52943860 ~ 52955716 (-)
G57949 NA non-coding downstream 169864 52546065 ~ 52551208 (-)
G57950 LOC106573080 non-coding downstream 171843 52547739 ~ 52549229 (-)
G57917 LOC106573080 non-coding downstream 181015 52538346 ~ 52540057 (-)
G57741 NA non-coding downstream 225606 52495173 ~ 52495466 (-)
G57730 NA non-coding downstream 236845 52483952 ~ 52484227 (-)
G58050 NA non-coding upstream 947 52723762 ~ 52724121 (-)
G58059 NA non-coding upstream 11273 52734088 ~ 52739028 (-)
G58080 NA non-coding upstream 56472 52779287 ~ 52783498 (-)
G58138 NA non-coding upstream 141549 52864364 ~ 52864565 (-)
G57742 NA other downstream 224838 52495898 ~ 52496234 (-)
G56764 NA other downstream 973852 51746617 ~ 51747220 (-)
G56372 NA other downstream 1316729 51400727 ~ 51412569 (-)
LOC110524514 borcs5 other downstream 1929003 50777716 ~ 50792069 (-)
G55627 NA other downstream 1953641 50765363 ~ 50767431 (-)
G58565 LOC106561659 other upstream 416643 53139458 ~ 53140304 (-)
LOC110525078 LOC105021811 other upstream 611909 53334724 ~ 53338484 (-)
G58718 LOC100194703 other upstream 703149 53425964 ~ 53426316 (-)
G58842 NA other upstream 865607 53588422 ~ 53588770 (-)
LOC110525178 LOC106581842 other upstream 1039140 53761612 ~ 53774544 (-)

Expression


Co-expression Network