G58475 (LOC106573070)


Basic Information

Item Value
gene id G58475
gene name LOC106573070
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52912660 ~ 52915682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65014
ttgcatttatatttttgttcagtatagtactTCACTGATTATACAAATCCAGACCAACATCAAAGGGTTACGGCTAAGCAGAAGGTAGTGAAATGTGACCGGCTGATTTAGTTGGGATACTCACGCCCAGATGCCCTCCTCTGCGAACATCTTGGGGGCACACTGTCTGAGGTTGCTGGCGTAGCCAGGGCAGGTCTGGATACGTACTTTACACGCCTCCATAGGGGCCAGGGCGATGTCAGCAAAGAACTCAGCACTGGCAGACGCAGCCAGGTAGAGGGAGGTCCTCCACAGATAGGTGTTTTCCTCTCCGATAAAATCGCTGTAGGTGATCTTGAACACCTCATAGAAGCCAAACTTGCAGAGACCCTGCATGGAGTAGCCGATGAAAGTAGGAGCCCAGCCCTTAGCCAGCCCCCGCATGCCATCCTCCTTTATGGTGATGGAGAAGCCCTTGAAGATGCTCTTGTACTTGTCTGGGTCCACCTAGACAACCCATTCAAAACAGATTGGTTAATGGATGTGAACTAGTAGT

Function

NR:

description
phosphate carrier protein, mitochondrial isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65014 True 535 lncRNA 0.50 2 52912660 52915682

Neighbor

gene id symbol gene type direction distance location
LOC110521107 LOC106573149 coding downstream 93718 52816161 ~ 52818942 (-)
LOC110532414 LOC106573136 coding downstream 97375 52810849 ~ 52815285 (-)
LOC110524843 LOC106573072 coding downstream 143496 52766482 ~ 52769164 (-)
LOC110524838 LOC106573075 coding downstream 159355 52744317 ~ 52753305 (-)
LOC118964326 NA coding downstream 230047 52681889 ~ 52682613 (-)
LOC110524896 LOC106573068 coding upstream 28178 52943860 ~ 52955716 (-)
LOC118964864 NA coding upstream 94286 53007483 ~ 53020119 (-)
LOC110524937 LOC106573065 coding upstream 132058 53047740 ~ 53059946 (-)
LOC110524998 NA coding upstream 161976 53077658 ~ 53084723 (-)
ucmab LOC106573148 coding upstream 322653 53238335 ~ 53250903 (-)
G58458 LOC106573071 non-coding downstream 22867 52887539 ~ 52889793 (-)
G58141 NA non-coding downstream 47046 52865414 ~ 52865614 (-)
G58138 NA non-coding downstream 48095 52864364 ~ 52864565 (-)
G58080 NA non-coding downstream 129162 52779287 ~ 52783498 (-)
G58469 NA non-coding upstream 9150 52924832 ~ 52925473 (-)
G58479 NA non-coding upstream 10541 52926223 ~ 52926551 (-)
G58485 NA non-coding upstream 25541 52941223 ~ 52941464 (-)
G58518 NA non-coding upstream 112673 53028355 ~ 53028714 (-)
G57742 NA other downstream 416426 52495898 ~ 52496234 (-)
G56764 NA other downstream 1165440 51746617 ~ 51747220 (-)
G56372 NA other downstream 1508317 51400727 ~ 51412569 (-)
LOC110524514 borcs5 other downstream 2120591 50777716 ~ 50792069 (-)
G55627 NA other downstream 2145229 50765363 ~ 50767431 (-)
G58565 LOC106561659 other upstream 223776 53139458 ~ 53140304 (-)
LOC110525078 LOC105021811 other upstream 419042 53334724 ~ 53338484 (-)
G58718 LOC100194703 other upstream 510282 53425964 ~ 53426316 (-)
G58842 NA other upstream 672740 53588422 ~ 53588770 (-)
LOC110525178 LOC106581842 other upstream 846273 53761612 ~ 53774544 (-)

Expression


Co-expression Network