G58192


Basic Information

Item Value
gene id G58192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53031123 ~ 53031953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU64695
tcacgatagcagcacccacctgtagcacgcactccagctgGTAtatctggtcacccccaaaaccaattcttcctttggccgcctctccttccagttctctgctgccaatgactggaacgaactacaaaaatctctgaaactggaaacacatctccctcactagctttaagcaccagctgtcagagcagctcacagattactgcacctgtacatagcccatctataatttatcccaagcaactacctcttcccctactgtatttatttattttgctcctttgcaccccattatttttaattctactttgcacattcaaGTCTactattccagtgttttacttcctatattgtatttactttgccaccatggcctttttttgcctttacctcccttatctcacctcatttgctcacatcgtatatagacttatttttctactgtattattgactgtttgttttactccatgtgtaactctgtgttgttgtatgtgttgaactgctttgctttatcttggccagattgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaataaaggtgaaataaataaataaaaataaatagtcagtaagcagttagaCCGACGGGCCCGGTAGCAATTaaataataaaaccaaaagcttaccttgacttggaagagttccagtgttgtgtttgttagtcatagccagctagctaacatagcatccctctatttgagccgggtgtttaattaactaaactagccagctgcatttgctagctaagtaacaGTTAAattaaactggaaaaaaaattaCGAtgcttgcttctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64695 True 831 lncRNA 0.45 1 53031123 53031953

Neighbor

gene id symbol gene type direction distance location
LOC118964862 NA coding upstream 45874 52965815 ~ 52988549 (+)
LOC110524905 s35b4 coding upstream 68291 52955803 ~ 52962832 (+)
LOC110524881 LOC106573069 coding upstream 94248 52925635 ~ 52936875 (+)
LOC110524847 LOC106561671 coding upstream 105650 52904644 ~ 52925473 (+)
LOC110524844 LOC106573071 coding upstream 141263 52882870 ~ 52889860 (+)
LOC110524927 LOC106573064 coding downstream 28000 53059953 ~ 53072748 (+)
LOC110524948 LOC106573061 coding downstream 49020 53080973 ~ 53149689 (+)
LOC110524999 LOC106573060 coding downstream 127280 53159233 ~ 53181760 (+)
LOC110525010 LOC106573059 coding downstream 155065 53187018 ~ 53233174 (+)
LOC110525022 LOC106573057 coding downstream 218656 53250609 ~ 53296485 (+)
G58230 NA non-coding upstream 33693 52997224 ~ 52997430 (+)
G58229 NA non-coding upstream 34281 52996626 ~ 52996842 (+)
G58205 NA non-coding upstream 87866 52942885 ~ 52943257 (+)
G58134 NA non-coding upstream 168349 52862572 ~ 52862774 (+)
G58278 NA non-coding downstream 172123 53204076 ~ 53206257 (+)
G58187 NA non-coding downstream 201582 53233535 ~ 53314985 (+)
G58181 NA non-coding downstream 302788 53334741 ~ 53337311 (+)
G58369 NA non-coding downstream 393587 53425540 ~ 53425822 (+)
G58371 NA non-coding downstream 394674 53426627 ~ 53426922 (+)
LOC110524575 fgf3 other upstream 1580188 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 2947127 50037523 ~ 50184257 (+)
G53181 NA other upstream 4137211 48893497 ~ 48893912 (+)
G52324 NA other upstream 4647866 48380542 ~ 48383257 (+)
G52080 NA other upstream 5006165 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 634262 53632830 ~ 53705421 (+)
G59031 NA other downstream 956187 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 1012896 54044813 ~ 54089850 (+)
G59963 NA other downstream 1689235 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2873555 55905508 ~ 55923376 (+)

Expression


Co-expression Network