G58613


Basic Information

Item Value
gene id G58613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53384617 ~ 53386535 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65173
aagtaggcttacccaattttcatacttggTTAAAAgtaaatagaaaatgactcaagtaaaatttAAAGTAATCCATTAACCTGGTTTTAAATATAATTAAGTATcaacagtaaatgtaattgctcaaatattcTTAAGTATCCAAAGTAAAAGaacaagtataaataatttcaaattcgtTATTTTAAGCAAACGAGGCAGCAggattttctgtttttattttatttacagatagccaggggcacactcaaaaactcagacataatttacaaacaaagcattttcgTTAAGTGAGATGACCAGggagtgcatgaattggacctgTCTTGCTCTGCATTccccttacaaaaaaagattgcagtcagttagagtgcagtatagctgtagtatgctgcaaatactgtgTTCAAAATAACACCTTTTTTTcaactgcagtacactgtagtTATTCTGTAATCACTGCATCCAAAATATCAAAGTCGACTGCAGGTACTGCACTTTAtctgcagtttcaaaactgcaatatTTTTTTGTACGGGGCAAAATGCAacaagtacttttaggtgtcagggaaaatgttatggagtagaaagtacattattttcattaggaatgtagtggagtaaaagtaaaagttgtcccaAATAGAAATACtaaataaagtaaagtacaaaaataaataacatgtaGCCCTTTTCTACAGTCAAATtacctcatgggtggaatgttattcatatttttattatttcataattaataaacattatttcaAAAAACCTGCcaaaaatccagtgtttctatgcCAAACGGTTTtgctatatttcagtcttctatgatgtatataaagtgtaatattggaacgcaaactcaaaattgaatgcATTTCATTCAACTCTTTATCTGACATGGTAAAGGTGACTTATTTCctttaaacccataaccatgtgtgtgaggtgtatacttttgtttcacaCTAGATTTGTTTAAGATTACCAAGAAACACCCTGATTTACCCCTCTGCAGTAAATGGTTATTAAGTAGTACTACTTTAGAACCACTGTTAAGTAGaactactttacaccactgttcaTTTGCCAAATCAAAGGAATGGTCCATTCATGTACATTCTCAAGGCCTCCTGCATCCGTGTCCTGTTCGCAAGAGATGTGTAAAGTTATGATACGCCTAATTATCCCATGTTTCCTCTATATTGCAGAATTACAGAACAATAATAATGTCCATTGGTTACCTCACCTGGTCAAAGAAATACAGTGGTCGGGGTCTTAAATCTGTCATTATTAATAATTCCACTCAATTACAAACTCAACATATTGTCTAGATCTGGTGCCAAATACACACATTTGAACCCAAGTAGAAGAAGAGAAGCGAGTGCAGGTGTCCGTCAGAATAACATTGGACAAACCTCCCTTTTCATCTAGCTATTAGTGTAAATGTAACCTTCATCCTTTTAGTTTGATTTTGCGGAAACGTGTTGCCTGGATACACTGCACAGGGCGGTCTATAAATGTGTTCACGCACCAGAAATGATAAAAATCCTGTAAACAATCTGAAAAAACAACATCGACAATTACAAACCACCGGATCACTCCTCTTCTACAAGTAGAATGTGGCTCGAGCACGTGATAACTTGCAAACACAAGTTATGCGAAACAAAGTGGTCCCTGTCCCCCAGTGCACAGAGAGAGCCCAGCAACTTGAGATGGACGCGCTAGCACATATTTGGATGATAGTTTAGATCAAGGGCTCTCTTTATTATGTATTTGTTACTCATTTAAACGACTAGTGTCATAGTGATAATGTGTATGCACATTTGATCATCTATTTGACTTTGATAATACATCATATTCCATTTCATACTATATATTGAAATGGGTCAACAAAGTTAATATAGAATCGCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65173 True 1919 lncRNA 0.51 1 53384617 53386535

Neighbor

gene id symbol gene type direction distance location
LOC110525089 LOC106573055 coding downstream 141 53373701 ~ 53384476 (-)
LOC110525078 LOC105021811 coding downstream 46133 53334724 ~ 53338484 (-)
LOC110525034 elk3 coding downstream 74492 53298363 ~ 53310125 (-)
ucmab LOC106573148 coding downstream 133714 53238335 ~ 53250903 (-)
LOC110524998 NA coding downstream 299894 53077658 ~ 53084723 (-)
LOC110525255 LOC106573039 coding upstream 327178 53713713 ~ 53758738 (-)
LOC110525178 LOC106581842 coding upstream 375077 53761612 ~ 53774544 (-)
LOC118964330 NA coding upstream 392006 53778541 ~ 53780182 (-)
LOC118964334 NA coding upstream 414494 53801029 ~ 53802670 (-)
LOC118964895 LOC106581842 coding upstream 427450 53813985 ~ 53822325 (-)
G58672 NA non-coding downstream 36638 53345733 ~ 53347979 (-)
G58659 NA non-coding downstream 88268 53295248 ~ 53296349 (-)
G58596 NA non-coding downstream 179302 53204782 ~ 53205315 (-)
G58523 NA non-coding downstream 336946 53047592 ~ 53047671 (-)
G58519 NA non-coding downstream 352596 53030578 ~ 53032021 (-)
G58694 NA non-coding upstream 7413 53393948 ~ 53400122 (-)
G58717 NA non-coding upstream 37063 53423598 ~ 53423861 (-)
G58719 NA non-coding upstream 40089 53426624 ~ 53426857 (-)
G58720 NA non-coding upstream 40680 53427215 ~ 53427535 (-)
G58723 NA non-coding upstream 43201 53429736 ~ 53430047 (-)
G58565 LOC106561659 other downstream 244313 53139458 ~ 53140304 (-)
G57742 NA other downstream 888383 52495898 ~ 52496234 (-)
G56764 NA other downstream 1637397 51746617 ~ 51747220 (-)
G56372 NA other downstream 1980274 51400727 ~ 51412569 (-)
G58718 LOC100194703 other upstream 39429 53425964 ~ 53426316 (-)
G58842 NA other upstream 201887 53588422 ~ 53588770 (-)
G58958 LOC106581842 other upstream 405295 53791830 ~ 53797014 (-)
G59978 NA other upstream 1342596 54729131 ~ 54737244 (-)

Expression


Co-expression Network