G58717



Basic Information


Item Value
gene id G58717
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53423598 ~ 53423861 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU65284
ggtaactctaatgaacttatcctctgcagcaggatAAGTGGAATGTGGTAACTCCGGGTCTTCCTTcttgtgacggtcctcatgagatccagtttcattacagtgcttgatggtttttgctactgcacttgaagaaactttcaaagttcttgaaattttccgcattgactgaccttcatgtcttaaagtaatggactgtcgtttctctttgcttagttGAGCTGTTaagccataatatggacttggtcttttaccaaatagggc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU65284 True 264 lncRNA 0.46 1 53423598 53423861

Neighbor


gene id symbol gene type direction distance location
LOC110525089 LOC106573055 coding downstream 39122 53373701 ~ 53384476 (-)
LOC110525078 LOC105021811 coding downstream 85114 53334724 ~ 53338484 (-)
LOC110525034 elk3 coding downstream 113473 53298363 ~ 53310125 (-)
ucmab LOC106573148 coding downstream 172695 53238335 ~ 53250903 (-)
LOC110524998 NA coding downstream 338875 53077658 ~ 53084723 (-)
LOC110525255 LOC106573039 coding upstream 289852 53713713 ~ 53758738 (-)
LOC110525178 LOC106581842 coding upstream 337751 53761612 ~ 53774544 (-)
LOC118964330 NA coding upstream 354680 53778541 ~ 53780182 (-)
LOC118964334 NA coding upstream 377168 53801029 ~ 53802670 (-)
LOC118964895 LOC106581842 coding upstream 390124 53813985 ~ 53822325 (-)
G58694 NA non-coding downstream 23476 53393948 ~ 53400122 (-)
G58613 NA non-coding downstream 37063 53384617 ~ 53386535 (-)
G58672 NA non-coding downstream 75619 53345733 ~ 53347979 (-)
G58659 NA non-coding downstream 127249 53295248 ~ 53296349 (-)
G58596 NA non-coding downstream 218283 53204782 ~ 53205315 (-)
G58719 NA non-coding upstream 2763 53426624 ~ 53426857 (-)
G58720 NA non-coding upstream 3354 53427215 ~ 53427535 (-)
G58723 NA non-coding upstream 5875 53429736 ~ 53430047 (-)
G58724 NA non-coding upstream 6244 53430105 ~ 53430388 (-)
G58730 NA non-coding upstream 11900 53435761 ~ 53436017 (-)
G58565 LOC106561659 other downstream 283294 53139458 ~ 53140304 (-)
G57742 NA other downstream 927364 52495898 ~ 52496234 (-)
G56764 NA other downstream 1676378 51746617 ~ 51747220 (-)
G56372 NA other downstream 2019255 51400727 ~ 51412569 (-)
G58718 LOC100194703 other upstream 2103 53425964 ~ 53426316 (-)
G58842 NA other upstream 164561 53588422 ~ 53588770 (-)
G58958 LOC106581842 other upstream 367969 53791830 ~ 53797014 (-)
G59978 NA other upstream 1305270 54729131 ~ 54737244 (-)

Expression



Co-expression Network