G58371


Basic Information

Item Value
gene id G58371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53426627 ~ 53426922 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU64908
cgataaatggttgatttaggtgcattcttactggcagcaatatccttgcctgtgaagccctttttgtgcaaagcaatgatgacggcacatgtttccttgcaggtaatcatggttgacagaggaagaacaatgattccaagcaccaccctcctttttgaAGCtagttattcgaactcaatcagcatgacagagtgatctccagccttgtcctcatcaacactcacacctgtgttaacgagagaatcactgacatgttgtcagctggtccttttgtggcagggctgaaatacaGCGGg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64908 True 296 lncRNA 0.46 1 53426627 53426922

Neighbor

gene id symbol gene type direction distance location
LOC110525096 LOC106573053 coding upstream 3873 53399050 ~ 53422754 (+)
LOC110532423 LOC106561694 coding upstream 53165 53355751 ~ 53373462 (+)
LOC110525022 LOC106573057 coding upstream 130142 53250609 ~ 53296485 (+)
LOC110525010 LOC106573059 coding upstream 193453 53187018 ~ 53233174 (+)
LOC110524999 LOC106573060 coding upstream 244867 53159233 ~ 53181760 (+)
LOC110525151 LOC106561689 coding downstream 10612 53437534 ~ 53485553 (+)
LOC110525170 LOC106573051 coding downstream 64924 53491846 ~ 53557609 (+)
LOC110516195 LOC106581842 coding downstream 171272 53598194 ~ 53620959 (+)
LOC118936380 LOC106581842 coding downstream 205908 53632830 ~ 53705421 (+)
LOC118964886 NA coding downstream 258479 53685401 ~ 53686098 (+)
G58369 NA non-coding upstream 805 53425540 ~ 53425822 (+)
G58181 NA non-coding upstream 89316 53334741 ~ 53337311 (+)
G58187 NA non-coding upstream 111642 53233535 ~ 53314985 (+)
G58278 NA non-coding upstream 220370 53204076 ~ 53206257 (+)
G58192 NA non-coding upstream 394674 53031123 ~ 53031953 (+)
G58372 NA non-coding downstream 42 53426964 ~ 53427210 (+)
G58346 LOC106561689 non-coding downstream 10664 53437586 ~ 53558274 (+)
G58840 NA non-coding downstream 160040 53586962 ~ 53587198 (+)
G58843 NA non-coding downstream 162991 53589913 ~ 53590161 (+)
G58845 NA non-coding downstream 163959 53590881 ~ 53591113 (+)
LOC110524575 fgf3 other upstream 1975692 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3342631 50037523 ~ 50184257 (+)
G53181 NA other upstream 4532715 48893497 ~ 48893912 (+)
G52324 NA other upstream 5043370 48380542 ~ 48383257 (+)
G52080 NA other upstream 5401669 48006674 ~ 48024958 (+)
G59031 NA other downstream 561218 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 617927 54044813 ~ 54089850 (+)
G59963 NA other downstream 1294266 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2478586 55905508 ~ 55923376 (+)

Expression


Co-expression Network