G58840


Basic Information

Item Value
gene id G58840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53586962 ~ 53587198 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65413
catatatatatatatatgacaaatCCCCCTCTTCTTATCTActagacgtgaaaactatagcagaaaggtggTGGTTCCATTTGTGGGTAAACATAAGGTGGTGCTTTTAACCTTGTCTGGTGtgcatggtgggtctgtaggtgtagtcctacgtttgtgtgtgtgagattgaaggGAGTGGTGCTAGGAATGTTATCAGGGATAGGGGTTTGGGTGAGAGGGGTTGATGCTTTAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65413 True 237 lncRNA 0.44 1 53586962 53587198

Neighbor

gene id symbol gene type direction distance location
LOC110525170 LOC106573051 coding upstream 29353 53491846 ~ 53557609 (+)
LOC110525151 LOC106561689 coding upstream 101409 53437534 ~ 53485553 (+)
LOC110525096 LOC106573053 coding upstream 164208 53399050 ~ 53422754 (+)
LOC110532423 LOC106561694 coding upstream 213500 53355751 ~ 53373462 (+)
LOC110525022 LOC106573057 coding upstream 290477 53250609 ~ 53296485 (+)
LOC110516195 LOC106581842 coding downstream 10996 53598194 ~ 53620959 (+)
LOC118936380 LOC106581842 coding downstream 45632 53632830 ~ 53705421 (+)
LOC118964886 NA coding downstream 98203 53685401 ~ 53686098 (+)
LOC110525273 LOC106561706 coding downstream 299722 53886920 ~ 53903845 (+)
LOC110525287 LOC106573038 coding downstream 326730 53913928 ~ 53938476 (+)
G58346 LOC106561689 non-coding upstream 28688 53437586 ~ 53558274 (+)
G58372 NA non-coding upstream 159752 53426964 ~ 53427210 (+)
G58371 NA non-coding upstream 160040 53426627 ~ 53426922 (+)
G58369 NA non-coding upstream 161140 53425540 ~ 53425822 (+)
G58181 NA non-coding upstream 249651 53334741 ~ 53337311 (+)
G58843 NA non-coding downstream 2715 53589913 ~ 53590161 (+)
G58845 NA non-coding downstream 3683 53590881 ~ 53591113 (+)
G58849 NA non-coding downstream 9835 53597033 ~ 53597391 (+)
G58855 NA non-coding downstream 11003 53598201 ~ 53634505 (+)
LOC110524575 fgf3 other upstream 2136027 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3502966 50037523 ~ 50184257 (+)
G53181 NA other upstream 4693050 48893497 ~ 48893912 (+)
G52324 NA other upstream 5203705 48380542 ~ 48383257 (+)
G52080 NA other upstream 5562004 48006674 ~ 48024958 (+)
G59031 NA other downstream 400942 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 457651 54044813 ~ 54089850 (+)
G59963 NA other downstream 1133990 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2318310 55905508 ~ 55923376 (+)

Expression


Co-expression Network