G58855


Basic Information

Item Value
gene id G58855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53598201 ~ 53634505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65428
ACTGTTTCCACCACTGCACTGGTTCTGTGTATAAACCATTTAGTAATAACTTTTACCCAAAGCGATTTAGCTACGATCATGCTTGCGCTTTCCCGCAAAGTATTGTTCCTAGAGATACGGAATATGCCGCTGTTAAGTGGAAACGTTATTTTCATTTGAGTTGGTTGATCAAGGACCGAAGACTCCGTACGGAAGCTTCTGCAACGAGTCGTCTGTATCAACAGTAGCTCGTTGTGGGACGAAGCAATGGCCATGCACATacacattttacgtatgggtgctCCCGGGAATCGAATTCATAATTCttgcgttgcaagcgccatgctgtaccaactgagctacaggaccacAGACAACAATAGCCAACGAGTTTAAATGAGGATGATCCACATGATCATCAAAGTTTGGAAGGTCAAGTCCAGAAAATGAAGAATGATATCCTGGGTTTAAACTATCCAGAAGATAGTGAAGTGAAGGATCCCCTGCCTCAGATCGAGCTGAAGGCTGTGACAAGGAGAAAAGTTAAGGTGAGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581842

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65428 True 534 lncRNA 0.44 3 53598201 53634505

Neighbor

gene id symbol gene type direction distance location
LOC110525170 LOC106573051 coding upstream 40592 53491846 ~ 53557609 (+)
LOC110525151 LOC106561689 coding upstream 112648 53437534 ~ 53485553 (+)
LOC110525096 LOC106573053 coding upstream 175447 53399050 ~ 53422754 (+)
LOC110532423 LOC106561694 coding upstream 224739 53355751 ~ 53373462 (+)
LOC110525022 LOC106573057 coding upstream 301716 53250609 ~ 53296485 (+)
LOC118964886 NA coding downstream 50896 53685401 ~ 53686098 (+)
LOC110525273 LOC106561706 coding downstream 252415 53886920 ~ 53903845 (+)
LOC110525287 LOC106573038 coding downstream 279423 53913928 ~ 53938476 (+)
LOC110525297 LOC106573037 coding downstream 321290 53955795 ~ 53966503 (+)
LOC110525327 LOC106573036 coding downstream 410308 54044813 ~ 54089850 (+)
G58849 NA non-coding upstream 810 53597033 ~ 53597391 (+)
G58845 NA non-coding upstream 7088 53590881 ~ 53591113 (+)
G58843 NA non-coding upstream 8040 53589913 ~ 53590161 (+)
G58840 NA non-coding upstream 11003 53586962 ~ 53587198 (+)
G58346 LOC106561689 non-coding upstream 39927 53437586 ~ 53558274 (+)
G58872 NA non-coding downstream 23297 53657802 ~ 53692144 (+)
G58852 NA non-coding downstream 78832 53713337 ~ 53713755 (+)
G58906 NA non-coding downstream 125329 53759834 ~ 53760090 (+)
G58907 NA non-coding downstream 126154 53760659 ~ 53760870 (+)
G58909 LOC106581842 non-coding downstream 130675 53765180 ~ 53765412 (+)
LOC110524575 fgf3 other upstream 2147266 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3514205 50037523 ~ 50184257 (+)
G53181 NA other upstream 4704289 48893497 ~ 48893912 (+)
G52324 NA other upstream 5214944 48380542 ~ 48383257 (+)
G52080 NA other upstream 5573243 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 31710 53632830 ~ 53705421 (+)
G59031 NA other downstream 353635 53988140 ~ 53988597 (+)
G59963 NA other downstream 1086683 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2271003 55905508 ~ 55923376 (+)

Expression


Co-expression Network