G58872


Basic Information

Item Value
gene id G58872
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53657802 ~ 53692144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65445
taattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgctttatcttggccaggtcgcagttgcaaatgagaacttgttctcaactagcctacctggttaaataaaggtaaaataaaataaaataaatccatggtaagatggggaagaaatgcagcGCTATCGATTtacgggatgctctagagatGACAAGAATGACTTAAAGTCGCGAATGATCAATGACTGTGTAATAGTGTTCCATGGAGAAATGTAATGTGTAGAACCTGtataattgtaacggttttcctcctcttcgtcagaagaggagaggcgagaaggatcggaggaccaatatgcggagTGGTAAGTgcccatggttcttttaataagtaatattcaacatgaacacaactgaatacaaaaacaataaacgcgGAACGAAcgaaaacccaaaacagtaccgtgtggtgaaaaacacagacacggaaacaaacacccaccaagaaacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaacatagaaatcccaaaatcatagaaaaacacacatagactgcccaccccaactcacgccctgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65445 True 647 lncRNA 0.41 2 53657802 53692144

Neighbor

gene id symbol gene type direction distance location
LOC110516195 LOC106581842 coding upstream 36969 53598194 ~ 53620959 (+)
LOC110525170 LOC106573051 coding upstream 100193 53491846 ~ 53557609 (+)
LOC110525151 LOC106561689 coding upstream 172249 53437534 ~ 53485553 (+)
LOC110525096 LOC106573053 coding upstream 235048 53399050 ~ 53422754 (+)
LOC110532423 LOC106561694 coding upstream 284340 53355751 ~ 53373462 (+)
LOC110525273 LOC106561706 coding downstream 194776 53886920 ~ 53903845 (+)
LOC110525287 LOC106573038 coding downstream 221784 53913928 ~ 53938476 (+)
LOC110525297 LOC106573037 coding downstream 263651 53955795 ~ 53966503 (+)
LOC110525327 LOC106573036 coding downstream 352669 54044813 ~ 54089850 (+)
LOC118964411 NA coding downstream 550677 54242821 ~ 54249212 (+)
G58855 NA non-coding upstream 23297 53598201 ~ 53634505 (+)
G58849 NA non-coding upstream 60411 53597033 ~ 53597391 (+)
G58845 NA non-coding upstream 66689 53590881 ~ 53591113 (+)
G58843 NA non-coding upstream 67641 53589913 ~ 53590161 (+)
G58852 NA non-coding downstream 21193 53713337 ~ 53713755 (+)
G58906 NA non-coding downstream 67690 53759834 ~ 53760090 (+)
G58907 NA non-coding downstream 68515 53760659 ~ 53760870 (+)
G58909 LOC106581842 non-coding downstream 73036 53765180 ~ 53765412 (+)
G58962 NA non-coding downstream 119939 53812083 ~ 53812369 (+)
LOC110524575 fgf3 other upstream 2206867 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3573806 50037523 ~ 50184257 (+)
G53181 NA other upstream 4763890 48893497 ~ 48893912 (+)
G52324 NA other upstream 5274545 48380542 ~ 48383257 (+)
G52080 NA other upstream 5632844 48006674 ~ 48024958 (+)
G59031 NA other downstream 295996 53988140 ~ 53988597 (+)
G59963 NA other downstream 1029044 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2213364 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 2327332 56019476 ~ 56030371 (+)

Expression


Co-expression Network