G58958 (LOC106581842)


Basic Information

Item Value
gene id G58958
gene name LOC106581842
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53791830 ~ 53797014 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65545
CATTTAGTAATAACTTTTACCCAAAGCGATTTAGCTACGATCATGCTTGCGCTTTCCCGCAAAGTATTGTTCCTAGAGATACGGAATATGCCGCTGTTAAGTGGAAACGTTATTTCCATTTGAGTTGGTTGATCAAGGACCGAAGACTCCGTACGGAAGCTTCTGCAACGAGTCGTCTGTATCAACAGTAGCTCGTTGTGGGACGAAGCAATGGCCATGCACATacacattttacgtatgggtgctCCCGGGAATCGAACTCATAATTCttgcgttgcaagcgccatgctgtaccaactgagctacaggaccacAGACAACAATAGCCAACGAGTTTAAATGAGGATGATCCACATGATCATCAAAGTTTGGAAGGTCAAGTCCAGAAAATGAAGAATGATATCCTGGGTTTAAACTATCCAGAAGATAGTGAAGTGAAGGATCCCCTGCCTCAGATCGAGCTGAAGGCTGTGACAAGGAGAAAAGTTAAGACCAAGAGGAAGACCAGTGCCAACAGGCCCACAGTTGAACAGAGCACTGATACTGATGCAGCTGAGATAGATTTTGTTGATAATCAGAatgatgaagatgaggatgaGGTGAAGAAGGatcccctgcctcagatggaGCCGGATGCCGTGAAGAGAAATAAAGTCAAGACCAAGAGGACCAAGAGAAACAAAGTGGAGCAGATCACTGATACAGATGCAGGTCATAAATTAAACTCTAATTTCACTGAATGTAGTCCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581842

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65545 True 749 TUCP 0.44 4 53791830 53797014

Neighbor

gene id symbol gene type direction distance location
LOC118964330 NA coding downstream 11648 53778541 ~ 53780182 (-)
LOC110525178 LOC106581842 coding downstream 17286 53761612 ~ 53774544 (-)
LOC110525255 LOC106573039 coding downstream 33092 53713713 ~ 53758738 (-)
LOC110525089 LOC106573055 coding downstream 407354 53373701 ~ 53384476 (-)
LOC110525078 LOC105021811 coding downstream 453346 53334724 ~ 53338484 (-)
LOC118964334 NA coding upstream 4015 53801029 ~ 53802670 (-)
LOC118964895 LOC106581842 coding upstream 16971 53813985 ~ 53822325 (-)
LOC118964896 LOC106581842 coding upstream 25043 53822057 ~ 53836588 (-)
LOC118964340 NA coding upstream 43569 53840583 ~ 53841742 (-)
LOC110525263 LOC106581842 coding upstream 56846 53853860 ~ 53868090 (-)
G58954 NA non-coding downstream 31772 53759692 ~ 53760058 (-)
G58926 NA non-coding downstream 156864 53632654 ~ 53634966 (-)
G58850 NA non-coding downstream 194034 53597123 ~ 53597796 (-)
G58846 NA non-coding downstream 200367 53590934 ~ 53591463 (-)
G58819 NA non-coding downstream 228620 53562953 ~ 53563210 (-)
G59104 NA non-coding upstream 33733 53830747 ~ 53835745 (-)
G59110 NA non-coding upstream 59552 53856566 ~ 53917269 (-)
G59172 NA non-coding upstream 158301 53955315 ~ 53955541 (-)
G59178 NA non-coding upstream 174513 53971527 ~ 53971753 (-)
G59196 NA non-coding upstream 177191 53974205 ~ 53974501 (-)
G58842 NA other downstream 203060 53588422 ~ 53588770 (-)
G58718 LOC100194703 other downstream 365514 53425964 ~ 53426316 (-)
G58565 LOC106561659 other downstream 651526 53139458 ~ 53140304 (-)
G59978 NA other upstream 932117 54729131 ~ 54737244 (-)
G60516 NA other upstream 1273378 55070392 ~ 55070899 (-)
G60572 NA other upstream 1353227 55150241 ~ 55154258 (-)
G60614 NA other upstream 1396283 55193297 ~ 55193723 (-)
G60624 NA other upstream 1406403 55203417 ~ 55203742 (-)

Expression


Co-expression Network